Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.77■■□□□ 1.72
CCDC144BQ3MJ40 AC241377.3-202ENST00000626088 1088 ntBASIC25.77■■□□□ 1.72
CCDC144BQ3MJ40 AC241585.3-202ENST00000628937 1088 ntBASIC25.77■■□□□ 1.72
CCDC144BQ3MJ40 AC245100.8-202ENST00000629247 1058 ntBASIC25.77■■□□□ 1.72
CCDC144BQ3MJ40 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC144BQ3MJ40 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC144BQ3MJ40 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
CCDC144BQ3MJ40 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.76■■□□□ 1.71
CCDC144BQ3MJ40 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC144BQ3MJ40 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
CCDC144BQ3MJ40 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC144BQ3MJ40 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.76■■□□□ 1.71
CCDC144BQ3MJ40 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC144BQ3MJ40 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.76■■□□□ 1.71
CCDC144BQ3MJ40 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
CCDC144BQ3MJ40 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC144BQ3MJ40 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC144BQ3MJ40 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.75■■□□□ 1.71
CCDC144BQ3MJ40 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.75■■□□□ 1.71
CCDC144BQ3MJ40 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
CCDC144BQ3MJ40 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC144BQ3MJ40 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.75■■□□□ 1.71
CCDC144BQ3MJ40 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC144BQ3MJ40 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC144BQ3MJ40 AC006455.2-201ENST00000429931 906 ntBASIC25.75■■□□□ 1.71
CCDC144BQ3MJ40 AC087623.3-201ENST00000607047 1098 ntBASIC25.75■■□□□ 1.71
CCDC144BQ3MJ40 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC144BQ3MJ40 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 AC136469.2-201ENST00000623944 1028 ntBASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
CCDC144BQ3MJ40 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CCDC144BQ3MJ40 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CCDC144BQ3MJ40 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.73■■□□□ 1.71
CCDC144BQ3MJ40 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
CCDC144BQ3MJ40 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.73■■□□□ 1.71
CCDC144BQ3MJ40 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.73■■□□□ 1.71
CCDC144BQ3MJ40 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
CCDC144BQ3MJ40 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 IRS3P-201ENST00000223076 1006 ntBASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CCDC144BQ3MJ40 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.71■■□□□ 1.71
CCDC144BQ3MJ40 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CCDC144BQ3MJ40 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
CCDC144BQ3MJ40 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CCDC144BQ3MJ40 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CCDC144BQ3MJ40 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.7■■□□□ 1.7
CCDC144BQ3MJ40 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
CCDC144BQ3MJ40 MIR3181-201ENST00000578512 73 ntBASIC25.7■■□□□ 1.7
CCDC144BQ3MJ40 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CCDC144BQ3MJ40 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
CCDC144BQ3MJ40 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
CCDC144BQ3MJ40 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.69■■□□□ 1.7
CCDC144BQ3MJ40 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms