Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D28Q2M2D7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 pRNA.6-201ENST00000610482 90 ntBASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 pRNA.5-201ENST00000612139 90 ntBASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 pRNA.11-201ENST00000618423 90 ntBASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 pRNA.13-201ENST00000619112 90 ntBASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D28Q2M2D7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D28Q2M2D7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TBC1D28Q2M2D7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D28Q2M2D7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
TBC1D28Q2M2D7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D28Q2M2D7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D28Q2M2D7 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.28■□□□□ 0.68
TBC1D28Q2M2D7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.28■□□□□ 0.68
TBC1D28Q2M2D7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D28Q2M2D7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.28■□□□□ 0.68
TBC1D28Q2M2D7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.28■□□□□ 0.68
TBC1D28Q2M2D7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TBC1D28Q2M2D7 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.28■□□□□ 0.68
TBC1D28Q2M2D7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D28Q2M2D7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D28Q2M2D7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D28Q2M2D7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D28Q2M2D7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.27■□□□□ 0.68
TBC1D28Q2M2D7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.27■□□□□ 0.68
TBC1D28Q2M2D7 AL138724.1-201ENST00000606771 1088 ntBASIC19.27■□□□□ 0.68
TBC1D28Q2M2D7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.27■□□□□ 0.68
TBC1D28Q2M2D7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D28Q2M2D7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.27■□□□□ 0.68
TBC1D28Q2M2D7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D28Q2M2D7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D28Q2M2D7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.27■□□□□ 0.67
TBC1D28Q2M2D7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TBC1D28Q2M2D7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TBC1D28Q2M2D7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 AL499627.2-201ENST00000606283 725 ntBASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D28Q2M2D7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 SERBP1P1-201ENST00000396021 1160 ntBASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 MIR3181-201ENST00000578512 73 ntBASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TBC1D28Q2M2D7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D28Q2M2D7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TBC1D28Q2M2D7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D28Q2M2D7 UNC93B3-201ENST00000308076 687 ntBASIC19.24■□□□□ 0.67
TBC1D28Q2M2D7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D28Q2M2D7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TBC1D28Q2M2D7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TBC1D28Q2M2D7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D28Q2M2D7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TBC1D28Q2M2D7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.23■□□□□ 0.67
TBC1D28Q2M2D7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TBC1D28Q2M2D7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms