Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 RTT106YNL206C 1368 nt5.8□□□□□ -1.48
UBP3Q01477 UTP18YJL069C 1785 nt5.8□□□□□ -1.48
UBP3Q01477 NGL3YML118W 1518 nt5.8□□□□□ -1.48
UBP3Q01477 EPS1YIL005W 2106 nt5.8□□□□□ -1.48
UBP3Q01477 TBF1YPL128C 1689 nt5.8□□□□□ -1.48
UBP3Q01477 YCR024C-BYCR024C-B 267 nt5.8□□□□□ -1.48
UBP3Q01477 ERV29YGR284C 933 nt5.8□□□□□ -1.48
UBP3Q01477 YJL068CYJL068C 900 nt5.8□□□□□ -1.48
UBP3Q01477 CPR7YJR032W 1182 nt5.8□□□□□ -1.48
UBP3Q01477 YKL177WYKL177W 339 nt5.8□□□□□ -1.48
UBP3Q01477 MRPL16YBL038W 699 nt5.8□□□□□ -1.48
UBP3Q01477 HUA2YOR284W 732 nt5.8□□□□□ -1.48
UBP3Q01477 SCO1YBR037C 888 nt5.8□□□□□ -1.48
UBP3Q01477 FDC1YDR539W 1512 nt5.79□□□□□ -1.48 RIP-Chip
UBP3Q01477 MMT1YMR177W 1533 nt5.79□□□□□ -1.48
UBP3Q01477 NGL2YMR285C 1548 nt5.79□□□□□ -1.48
UBP3Q01477 RRN3YKL125W 1884 nt5.79□□□□□ -1.48
UBP3Q01477 AIR2YDL175C 1035 nt5.79□□□□□ -1.48
UBP3Q01477 CNL1YDR357C 369 nt5.79□□□□□ -1.48
UBP3Q01477 SEH1YGL100W 1050 nt5.79□□□□□ -1.48
UBP3Q01477 YIP5YGL161C 933 nt5.79□□□□□ -1.48 RIP-Chip
UBP3Q01477 JLP1YLL057C 1239 nt5.79□□□□□ -1.48
UBP3Q01477 ELO3YLR372W 1038 nt5.79□□□□□ -1.48
UBP3Q01477 SUB1YMR039C 879 nt5.79□□□□□ -1.48
UBP3Q01477 PRE7YBL041W 726 nt5.79□□□□□ -1.48
UBP3Q01477 YOL106WYOL106W 354 nt5.79□□□□□ -1.48
UBP3Q01477 MGE1YOR232W 687 nt5.79□□□□□ -1.48 RIP-Chip
UBP3Q01477 CAM1YPL048W 1248 nt5.79□□□□□ -1.48
UBP3Q01477 MUD1YBR119W 897 nt5.79□□□□□ -1.48
UBP3Q01477 UMP1YBR173C 447 nt5.79□□□□□ -1.48
UBP3Q01477 SNF3YDL194W 2655 nt5.79□□□□□ -1.48 RIP-Chip
UBP3Q01477 BUD14YAR014C 2130 nt5.78□□□□□ -1.48
UBP3Q01477 ASH1YKL185W 1767 nt5.78□□□□□ -1.48
UBP3Q01477 GPB1YOR371C 2694 nt5.78□□□□□ -1.48
UBP3Q01477 ADE3YGR204W 2841 nt5.78□□□□□ -1.48
UBP3Q01477 NHP10YDL002C 612 nt5.78□□□□□ -1.48
UBP3Q01477 snR83snR83 306 nt5.78□□□□□ -1.48
UBP3Q01477 YGL193CYGL193C 312 nt5.78□□□□□ -1.48
UBP3Q01477 YIL102C-AYIL102C-A 228 nt5.78□□□□□ -1.48
UBP3Q01477 YJR071WYJR071W 369 nt5.78□□□□□ -1.48
UBP3Q01477 MTD1YKR080W 963 nt5.78□□□□□ -1.48 RIP-Chip
UBP3Q01477 PWP1YLR196W 1731 nt5.78□□□□□ -1.48
UBP3Q01477 YMR144WYMR144W 1029 nt5.78□□□□□ -1.48
UBP3Q01477 RUF22RUF22 515 nt5.78□□□□□ -1.48
UBP3Q01477 PNO1YOR145C 825 nt5.78□□□□□ -1.48 RIP-Chip
UBP3Q01477 TMA16YOR252W 537 nt5.78□□□□□ -1.48
UBP3Q01477 PDH1YPR002W 1551 nt5.78□□□□□ -1.48
UBP3Q01477 YPR195CYPR195C 330 nt5.78□□□□□ -1.48
UBP3Q01477 GEP3YOR205C 1671 nt5.78□□□□□ -1.48
UBP3Q01477 TFC7YOR110W 1308 nt5.77□□□□□ -1.49
UBP3Q01477 POL12YBL035C 2118 nt5.77□□□□□ -1.49
UBP3Q01477 RAD55YDR076W 1221 nt5.77□□□□□ -1.49
UBP3Q01477 VMA7YGR020C 357 nt5.77□□□□□ -1.49
UBP3Q01477 YGR149WYGR149W 1299 nt5.77□□□□□ -1.49 RIP-Chip
UBP3Q01477 tR(ACG)Q2tR(ACG)Q2 74 nt5.77□□□□□ -1.49
UBP3Q01477 YIL060WYIL060W 435 nt5.77□□□□□ -1.49
UBP3Q01477 YMR315WYMR315W 1050 nt5.77□□□□□ -1.49
UBP3Q01477 MVD1YNR043W 1191 nt5.77□□□□□ -1.49
UBP3Q01477 YCL001W-AYCL001W-A 462 nt5.77□□□□□ -1.49
UBP3Q01477 YDR179W-AYDR179W-A 1392 nt5.77□□□□□ -1.49
UBP3Q01477 MBP1YDL056W 2502 nt5.77□□□□□ -1.49 RIP-Chip
UBP3Q01477 SOF1YLL011W 1470 nt5.77□□□□□ -1.49
UBP3Q01477 ACS2YLR153C 2052 nt5.76□□□□□ -1.49
UBP3Q01477 CTF13YMR094W 1437 nt5.76□□□□□ -1.49
UBP3Q01477 RAT1YOR048C 3021 nt5.76□□□□□ -1.49
UBP3Q01477 YDR008CYDR008C 351 nt5.76□□□□□ -1.49
UBP3Q01477 YER133W-AYER133W-A 342 nt5.76□□□□□ -1.49
UBP3Q01477 RSM27YGR215W 333 nt5.76□□□□□ -1.49
UBP3Q01477 MRPL13YKR006C 795 nt5.76□□□□□ -1.49
UBP3Q01477 YML119WYML119W 1074 nt5.76□□□□□ -1.49
UBP3Q01477 YNL050CYNL050C 813 nt5.76□□□□□ -1.49
UBP3Q01477 BUD21YOR078W 645 nt5.76□□□□□ -1.49 RIP-Chip
UBP3Q01477 ALG11YNL048W 1647 nt5.76□□□□□ -1.49
UBP3Q01477 YFL034WYFL034W 3222 nt5.76□□□□□ -1.49
UBP3Q01477 ZUO1YGR285C 1302 nt5.75□□□□□ -1.49
UBP3Q01477 VTC2YFL004W 2487 nt5.75□□□□□ -1.49
UBP3Q01477 RTK1YDL025C 1863 nt5.75□□□□□ -1.49 RIP-Chip
UBP3Q01477 YER067C-AYER067C-A 324 nt5.75□□□□□ -1.49
UBP3Q01477 TDH3YGR192C 999 nt5.75□□□□□ -1.49
UBP3Q01477 HIS6YIL020C 786 nt5.75□□□□□ -1.49
UBP3Q01477 YLR339CYLR339C 552 nt5.75□□□□□ -1.49
UBP3Q01477 RRT1YBL048W 312 nt5.75□□□□□ -1.49
UBP3Q01477 YNL162W-AYNL162W-A 219 nt5.75□□□□□ -1.49
UBP3Q01477 VPS21YOR089C 633 nt5.75□□□□□ -1.49
UBP3Q01477 MRM1YOR201C 1239 nt5.75□□□□□ -1.49
UBP3Q01477 SNF8YPL002C 702 nt5.75□□□□□ -1.49
UBP3Q01477 MCX1YBR227C 1563 nt5.75□□□□□ -1.49
UBP3Q01477 FRS1YLR060W 1788 nt5.75□□□□□ -1.49
UBP3Q01477 MNN2YBR015C 1794 nt5.75□□□□□ -1.49
UBP3Q01477 ARN1YHL040C 1884 nt5.75□□□□□ -1.49
UBP3Q01477 DBP5YOR046C 1449 nt5.74□□□□□ -1.49
UBP3Q01477 PFS1YHR185C 714 nt5.74□□□□□ -1.49
UBP3Q01477 GSP1YLR293C 660 nt5.74□□□□□ -1.49
UBP3Q01477 POR1YNL055C 852 nt5.74□□□□□ -1.49
UBP3Q01477 ETT1YOR051C 1239 nt5.74□□□□□ -1.49
UBP3Q01477 UFE1YOR075W 1041 nt5.74□□□□□ -1.49 RIP-Chip
UBP3Q01477 YPL162CYPL162C 822 nt5.74□□□□□ -1.49
UBP3Q01477 PWR1PWR1 941 nt5.74□□□□□ -1.49
UBP3Q01477 TOS4YLR183C 1470 nt5.74□□□□□ -1.49
UBP3Q01477 MEF2YJL102W 2460 nt5.74□□□□□ -1.49 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 19.4 ms