Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.46■□□□□ 0.71
NKX6-1P78426 AC099791.2-201ENST00000605725 427 ntBASIC19.46■□□□□ 0.71
NKX6-1P78426 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX6-1P78426 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.46■□□□□ 0.71
NKX6-1P78426 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX6-1P78426 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX6-1P78426 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX6-1P78426 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX6-1P78426 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
NKX6-1P78426 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX6-1P78426 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NKX6-1P78426 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX6-1P78426 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NKX6-1P78426 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.45■□□□□ 0.7
NKX6-1P78426 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.45■□□□□ 0.7
NKX6-1P78426 AC011298.3-201ENST00000615796 283 ntBASIC19.45■□□□□ 0.7
NKX6-1P78426 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX6-1P78426 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX6-1P78426 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX6-1P78426 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX6-1P78426 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NKX6-1P78426 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NKX6-1P78426 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.44■□□□□ 0.7
NKX6-1P78426 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX6-1P78426 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX6-1P78426 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.44■□□□□ 0.7
NKX6-1P78426 AC099791.1-201ENST00000416440 715 ntBASIC19.44■□□□□ 0.7
NKX6-1P78426 AL138724.1-201ENST00000606771 1088 ntBASIC19.44■□□□□ 0.7
NKX6-1P78426 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.44■□□□□ 0.7
NKX6-1P78426 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX6-1P78426 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX6-1P78426 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
NKX6-1P78426 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.44■□□□□ 0.7
NKX6-1P78426 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NKX6-1P78426 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NKX6-1P78426 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX6-1P78426 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX6-1P78426 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX6-1P78426 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.43■□□□□ 0.7
NKX6-1P78426 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX6-1P78426 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NKX6-1P78426 AC012676.1-201ENST00000574705 1949 ntBASIC19.43■□□□□ 0.7
NKX6-1P78426 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NKX6-1P78426 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX6-1P78426 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX6-1P78426 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NKX6-1P78426 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.43■□□□□ 0.7
NKX6-1P78426 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.43■□□□□ 0.7
NKX6-1P78426 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.43■□□□□ 0.7
NKX6-1P78426 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.43■□□□□ 0.7
NKX6-1P78426 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.43■□□□□ 0.7
NKX6-1P78426 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX6-1P78426 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.43■□□□□ 0.7
NKX6-1P78426 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NKX6-1P78426 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.43■□□□□ 0.7
NKX6-1P78426 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX6-1P78426 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX6-1P78426 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.43■□□□□ 0.7
NKX6-1P78426 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX6-1P78426 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
NKX6-1P78426 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.42■□□□□ 0.7
NKX6-1P78426 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX6-1P78426 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX6-1P78426 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX6-1P78426 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX6-1P78426 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.42■□□□□ 0.7
NKX6-1P78426 AC090192.1-201ENST00000517740 490 ntBASIC19.42■□□□□ 0.7
NKX6-1P78426 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.42■□□□□ 0.7
NKX6-1P78426 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NKX6-1P78426 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NKX6-1P78426 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.42■□□□□ 0.7
NKX6-1P78426 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX6-1P78426 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX6-1P78426 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NKX6-1P78426 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX6-1P78426 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX6-1P78426 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.41■□□□□ 0.7
NKX6-1P78426 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.41■□□□□ 0.7
NKX6-1P78426 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.41■□□□□ 0.7
NKX6-1P78426 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX6-1P78426 RARRES2P11-201ENST00000635158 484 ntBASIC19.41■□□□□ 0.7
NKX6-1P78426 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX6-1P78426 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.41■□□□□ 0.7
NKX6-1P78426 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX6-1P78426 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NKX6-1P78426 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.4■□□□□ 0.7
NKX6-1P78426 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.4■□□□□ 0.7
NKX6-1P78426 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.4■□□□□ 0.7
NKX6-1P78426 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.4■□□□□ 0.7
NKX6-1P78426 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX6-1P78426 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NKX6-1P78426 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX6-1P78426 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NKX6-1P78426 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.39■□□□□ 0.69
NKX6-1P78426 AC241377.3-202ENST00000626088 1088 ntBASIC19.39■□□□□ 0.69
NKX6-1P78426 AC241585.3-202ENST00000628937 1088 ntBASIC19.39■□□□□ 0.69
NKX6-1P78426 AC245100.8-202ENST00000629247 1058 ntBASIC19.39■□□□□ 0.69
NKX6-1P78426 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NKX6-1P78426 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX6-1P78426 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms