Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 tK(CUU)CtK(CUU)C 73 nt4.55□□□□□ -1.68
VPS9P54787 tK(CUU)D1tK(CUU)D1 73 nt4.55□□□□□ -1.68
VPS9P54787 tK(CUU)D2tK(CUU)D2 73 nt4.55□□□□□ -1.68
VPS9P54787 tK(CUU)E1tK(CUU)E1 73 nt4.55□□□□□ -1.68
VPS9P54787 tK(CUU)E2tK(CUU)E2 73 nt4.55□□□□□ -1.68
VPS9P54787 tK(CUU)FtK(CUU)F 73 nt4.55□□□□□ -1.68
VPS9P54787 tK(CUU)G1tK(CUU)G1 73 nt4.55□□□□□ -1.68
VPS9P54787 tK(CUU)G2tK(CUU)G2 73 nt4.55□□□□□ -1.68
VPS9P54787 tK(CUU)G3tK(CUU)G3 73 nt4.55□□□□□ -1.68
VPS9P54787 tK(CUU)ItK(CUU)I 73 nt4.55□□□□□ -1.68
VPS9P54787 tK(CUU)JtK(CUU)J 73 nt4.55□□□□□ -1.68
VPS9P54787 tK(CUU)KtK(CUU)K 73 nt4.55□□□□□ -1.68
VPS9P54787 tK(CUU)MtK(CUU)M 73 nt4.55□□□□□ -1.68
VPS9P54787 tK(CUU)PtK(CUU)P 73 nt4.55□□□□□ -1.68
VPS9P54787 YML119WYML119W 1074 nt4.55□□□□□ -1.68
VPS9P54787 MFA2YNL145W 117 nt4.55□□□□□ -1.68
VPS9P54787 snR37snR37 386 nt4.55□□□□□ -1.68
VPS9P54787 ARC40YBR234C 1155 nt4.55□□□□□ -1.68
VPS9P54787 CDC48YDL126C 2508 nt4.55□□□□□ -1.68
VPS9P54787 HSP82YPL240C 2130 nt4.55□□□□□ -1.68
VPS9P54787 NAM9YNL137C 1461 nt4.55□□□□□ -1.68
VPS9P54787 SYF1YDR416W 2580 nt4.55□□□□□ -1.68
VPS9P54787 PUS9YDL036C 1389 nt4.54□□□□□ -1.68
VPS9P54787 IME4YGL192W 1803 nt4.54□□□□□ -1.68
VPS9P54787 ERG26YGL001C 1050 nt4.54□□□□□ -1.68
VPS9P54787 RNA15YGL044C 891 nt4.54□□□□□ -1.68
VPS9P54787 RAI1YGL246C 1164 nt4.54□□□□□ -1.68
VPS9P54787 ECM34YHL043W 513 nt4.54□□□□□ -1.68
VPS9P54787 TTI2YJR136C 1266 nt4.54□□□□□ -1.68
VPS9P54787 DBR1YKL149C 1218 nt4.54□□□□□ -1.68
VPS9P54787 REG2YBR050C 1017 nt4.54□□□□□ -1.68
VPS9P54787 YPR071WYPR071W 636 nt4.54□□□□□ -1.68
VPS9P54787 SSH4YKL124W 1740 nt4.54□□□□□ -1.68
VPS9P54787 ZPR1YGR211W 1461 nt4.54□□□□□ -1.68
VPS9P54787 SAS4YDR181C 1446 nt4.54□□□□□ -1.68
VPS9P54787 SVF1YDR346C 1446 nt4.54□□□□□ -1.68
VPS9P54787 CUS1YMR240C 1311 nt4.53□□□□□ -1.68
VPS9P54787 RMD1YDL001W 1293 nt4.53□□□□□ -1.68
VPS9P54787 GSY1YFR015C 2127 nt4.53□□□□□ -1.68
VPS9P54787 SRB5YGR104C 924 nt4.53□□□□□ -1.68
VPS9P54787 EMG1YLR186W 759 nt4.53□□□□□ -1.68
VPS9P54787 GIP4YAL031C 2283 nt4.53□□□□□ -1.68
VPS9P54787 STV1YMR054W 2673 nt4.53□□□□□ -1.68
VPS9P54787 BUD8YLR353W 1812 nt4.53□□□□□ -1.68
VPS9P54787 MMM1YLL006W 1281 nt4.52□□□□□ -1.69
VPS9P54787 TDA5YLR426W 981 nt4.52□□□□□ -1.69
VPS9P54787 CDC21YOR074C 915 nt4.52□□□□□ -1.69
VPS9P54787 ICY2YPL250C 411 nt4.52□□□□□ -1.69
VPS9P54787 EAR1YMR171C 1653 nt4.51□□□□□ -1.69
VPS9P54787 DPH6YLR143W 2058 nt4.51□□□□□ -1.69
VPS9P54787 NPY1YGL067W 1155 nt4.51□□□□□ -1.69
VPS9P54787 GPP1YIL053W 753 nt4.51□□□□□ -1.69
VPS9P54787 ATG8YBL078C 354 nt4.51□□□□□ -1.69
VPS9P54787 REI1YBR267W 1182 nt4.51□□□□□ -1.69
VPS9P54787 KAP114YGL241W 3015 nt4.51□□□□□ -1.69
VPS9P54787 CEG1YGL130W 1380 nt4.51□□□□□ -1.69
VPS9P54787 YMR111CYMR111C 1389 nt4.51□□□□□ -1.69
VPS9P54787 RCM1YNL022C 1473 nt4.5□□□□□ -1.69
VPS9P54787 GSM1YJL103C 1857 nt4.5□□□□□ -1.69
VPS9P54787 TDA6YPR157W 1404 nt4.5□□□□□ -1.69
VPS9P54787 snR57snR57 88 nt4.5□□□□□ -1.69
VPS9P54787 YCR101CYCR101C 549 nt4.5□□□□□ -1.69
VPS9P54787 snR7-SsnR7-S 179 nt4.5□□□□□ -1.69
VPS9P54787 SPC3YLR066W 555 nt4.5□□□□□ -1.69
VPS9P54787 CDA2YLR308W 939 nt4.5□□□□□ -1.69
VPS9P54787 CPR3YML078W 549 nt4.5□□□□□ -1.69
VPS9P54787 IMP2YMR035W 534 nt4.5□□□□□ -1.69
VPS9P54787 YOL050CYOL050C 321 nt4.5□□□□□ -1.69
VPS9P54787 WRS1YOL097C 1299 nt4.5□□□□□ -1.69
VPS9P54787 IDI1YPL117C 867 nt4.5□□□□□ -1.69
VPS9P54787 SHE3YBR130C 1278 nt4.5□□□□□ -1.69
VPS9P54787 YER077CYER077C 2067 nt4.5□□□□□ -1.69
VPS9P54787 YGR125WYGR125W 3111 nt4.5□□□□□ -1.69
VPS9P54787 VHC1YBR235W 3363 nt4.5□□□□□ -1.69
VPS9P54787 PUF2YPR042C 3228 nt4.5□□□□□ -1.69
VPS9P54787 PRR2YDL214C 2100 nt4.49□□□□□ -1.69
VPS9P54787 ISR1YPR106W 1332 nt4.49□□□□□ -1.69
VPS9P54787 ADP1YCR011C 3150 nt4.49□□□□□ -1.69
VPS9P54787 MNN4YKL201C 3537 nt4.49□□□□□ -1.69
VPS9P54787 FAS2YPL231W 5664 nt4.49□□□□□ -1.69
VPS9P54787 NUP2YLR335W 2163 nt4.49□□□□□ -1.69
VPS9P54787 ARD1YHR013C 717 nt4.49□□□□□ -1.69
VPS9P54787 YNK1YKL067W 462 nt4.49□□□□□ -1.69
VPS9P54787 PIR3YKL163W 978 nt4.49□□□□□ -1.69
VPS9P54787 ACP1YKL192C 378 nt4.49□□□□□ -1.69
VPS9P54787 CPR6YLR216C 1116 nt4.49□□□□□ -1.69
VPS9P54787 YLR364C-AYLR364C-A 123 nt4.49□□□□□ -1.69
VPS9P54787 IBD2YNL164C 1056 nt4.49□□□□□ -1.69
VPS9P54787 POP3YNL282W 588 nt4.49□□□□□ -1.69
VPS9P54787 VPS21YOR089C 633 nt4.49□□□□□ -1.69
VPS9P54787 YMR221CYMR221C 1515 nt4.49□□□□□ -1.69
VPS9P54787 IMD2YHR216W 1572 nt4.48□□□□□ -1.69
VPS9P54787 IMA3YIL172C 1770 nt4.48□□□□□ -1.69
VPS9P54787 IMA4YJL221C 1770 nt4.48□□□□□ -1.69
VPS9P54787 ALE1YOR175C 1860 nt4.48□□□□□ -1.69
VPS9P54787 RPB7YDR404C 516 nt4.48□□□□□ -1.69
VPS9P54787 DCS2YOR173W 1062 nt4.48□□□□□ -1.69
VPS9P54787 PEP4YPL154C 1218 nt4.48□□□□□ -1.69
VPS9P54787 YAR1YPL239W 603 nt4.48□□□□□ -1.69
VPS9P54787 MDR1YGR100W 2853 nt4.47□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms