Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CLTCL1P53675 AC079630.1-202ENST00000618127 1840 ntBASIC32.31■■■□□ 2.76
CLTCL1P53675 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC32.31■■■□□ 2.76
CLTCL1P53675 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
CLTCL1P53675 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
CLTCL1P53675 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC32.31■■■□□ 2.76
CLTCL1P53675 KRT18P61-201ENST00000585825 1298 ntBASIC32.31■■■□□ 2.76
CLTCL1P53675 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CLTCL1P53675 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CLTCL1P53675 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
CLTCL1P53675 ME3-201ENST00000323418 1068 ntTSL 5 BASIC32.3■■■□□ 2.76
CLTCL1P53675 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CLTCL1P53675 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CLTCL1P53675 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC32.3■■■□□ 2.76
CLTCL1P53675 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CLTCL1P53675 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
CLTCL1P53675 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC32.29■■■□□ 2.76
CLTCL1P53675 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CLTCL1P53675 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
CLTCL1P53675 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
CLTCL1P53675 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
CLTCL1P53675 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CLTCL1P53675 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
CLTCL1P53675 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC32.29■■■□□ 2.76
CLTCL1P53675 SHD-204ENST00000599689 1729 ntTSL 5 BASIC32.28■■■□□ 2.76
CLTCL1P53675 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CLTCL1P53675 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
CLTCL1P53675 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CLTCL1P53675 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC32.28■■■□□ 2.76
CLTCL1P53675 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC32.28■■■□□ 2.76
CLTCL1P53675 RARRES2P11-201ENST00000635158 484 ntBASIC32.28■■■□□ 2.76
CLTCL1P53675 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CLTCL1P53675 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CLTCL1P53675 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC32.27■■■□□ 2.76
CLTCL1P53675 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
CLTCL1P53675 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CLTCL1P53675 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC32.27■■■□□ 2.76
CLTCL1P53675 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC32.27■■■□□ 2.76
CLTCL1P53675 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CLTCL1P53675 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CLTCL1P53675 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CLTCL1P53675 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CLTCL1P53675 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.76
CLTCL1P53675 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
CLTCL1P53675 AP005435.1-201ENST00000529293 1178 ntBASIC32.26■■■□□ 2.76
CLTCL1P53675 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC32.26■■■□□ 2.76
CLTCL1P53675 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC32.26■■■□□ 2.76
CLTCL1P53675 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.76
CLTCL1P53675 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC32.26■■■□□ 2.76
CLTCL1P53675 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CLTCL1P53675 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
CLTCL1P53675 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.75
CLTCL1P53675 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
CLTCL1P53675 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC32.26■■■□□ 2.75
CLTCL1P53675 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
CLTCL1P53675 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC32.26■■■□□ 2.75
CLTCL1P53675 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
CLTCL1P53675 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
CLTCL1P53675 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CLTCL1P53675 LINC00543-201ENST00000567234 1845 ntBASIC32.25■■■□□ 2.75
CLTCL1P53675 LHPP-203ENST00000392757 840 ntTSL 3 BASIC32.25■■■□□ 2.75
CLTCL1P53675 NT5C3AP1-201ENST00000394500 1012 ntBASIC32.25■■■□□ 2.75
CLTCL1P53675 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC32.25■■■□□ 2.75
CLTCL1P53675 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CLTCL1P53675 LINC01529-204ENST00000636474 1715 ntBASIC32.24■■■□□ 2.75
CLTCL1P53675 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CLTCL1P53675 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
CLTCL1P53675 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
CLTCL1P53675 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
CLTCL1P53675 TPRG1LP1-201ENST00000598702 760 ntBASIC32.24■■■□□ 2.75
CLTCL1P53675 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
CLTCL1P53675 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
CLTCL1P53675 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CLTCL1P53675 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CLTCL1P53675 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CLTCL1P53675 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
CLTCL1P53675 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC32.23■■■□□ 2.75
CLTCL1P53675 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CLTCL1P53675 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CLTCL1P53675 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CLTCL1P53675 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CLTCL1P53675 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC32.22■■■□□ 2.75
CLTCL1P53675 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC32.22■■■□□ 2.75
CLTCL1P53675 AL137784.2-201ENST00000607332 1000 ntBASIC32.22■■■□□ 2.75
CLTCL1P53675 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CLTCL1P53675 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC32.22■■■□□ 2.75
CLTCL1P53675 STX4-202ENST00000394998 1498 ntTSL 2 BASIC32.22■■■□□ 2.75
CLTCL1P53675 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
CLTCL1P53675 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CLTCL1P53675 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
CLTCL1P53675 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CLTCL1P53675 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CLTCL1P53675 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
CLTCL1P53675 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC32.21■■■□□ 2.75
CLTCL1P53675 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC32.21■■■□□ 2.75
CLTCL1P53675 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC32.2■■■□□ 2.75
CLTCL1P53675 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CLTCL1P53675 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC32.2■■■□□ 2.75
CLTCL1P53675 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.74
CLTCL1P53675 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms