Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GSK3AP49840 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GSK3AP49840 AC137767.1-201ENST00000602918 1920 ntBASIC19.33■□□□□ 0.69
GSK3AP49840 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GSK3AP49840 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
GSK3AP49840 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
GSK3AP49840 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GSK3AP49840 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GSK3AP49840 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.33■□□□□ 0.68
GSK3AP49840 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GSK3AP49840 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
GSK3AP49840 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
GSK3AP49840 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GSK3AP49840 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.32■□□□□ 0.68
GSK3AP49840 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
GSK3AP49840 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GSK3AP49840 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.32■□□□□ 0.68
GSK3AP49840 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GSK3AP49840 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
GSK3AP49840 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.32■□□□□ 0.68
GSK3AP49840 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
GSK3AP49840 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GSK3AP49840 ESRRAP2-201ENST00000418437 1549 ntBASIC19.32■□□□□ 0.68
GSK3AP49840 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
GSK3AP49840 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GSK3AP49840 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
GSK3AP49840 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.32■□□□□ 0.68
GSK3AP49840 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GSK3AP49840 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.32■□□□□ 0.68
GSK3AP49840 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GSK3AP49840 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GSK3AP49840 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.32■□□□□ 0.68
GSK3AP49840 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GSK3AP49840 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
GSK3AP49840 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.32■□□□□ 0.68
GSK3AP49840 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GSK3AP49840 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GSK3AP49840 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
GSK3AP49840 AL353803.4-201ENST00000565882 1934 ntBASIC19.31■□□□□ 0.68
GSK3AP49840 TSPY9P-201ENST00000440215 945 ntBASIC19.31■□□□□ 0.68
GSK3AP49840 TSPY11P-201ENST00000442607 1045 ntBASIC19.31■□□□□ 0.68
GSK3AP49840 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.31■□□□□ 0.68
GSK3AP49840 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GSK3AP49840 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GSK3AP49840 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GSK3AP49840 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
GSK3AP49840 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GSK3AP49840 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GSK3AP49840 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
GSK3AP49840 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.31■□□□□ 0.68
GSK3AP49840 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GSK3AP49840 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GSK3AP49840 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.3■□□□□ 0.68
GSK3AP49840 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GSK3AP49840 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GSK3AP49840 AC010997.5-201ENST00000609182 354 ntBASIC19.3■□□□□ 0.68
GSK3AP49840 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.3■□□□□ 0.68
GSK3AP49840 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
GSK3AP49840 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GSK3AP49840 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
GSK3AP49840 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GSK3AP49840 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GSK3AP49840 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
GSK3AP49840 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
GSK3AP49840 AC144652.1-201ENST00000609974 1624 ntBASIC19.29■□□□□ 0.68
GSK3AP49840 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GSK3AP49840 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GSK3AP49840 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GSK3AP49840 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GSK3AP49840 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.29■□□□□ 0.68
GSK3AP49840 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.29■□□□□ 0.68
GSK3AP49840 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.29■□□□□ 0.68
GSK3AP49840 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GSK3AP49840 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GSK3AP49840 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
GSK3AP49840 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GSK3AP49840 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GSK3AP49840 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.28■□□□□ 0.68
GSK3AP49840 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.28■□□□□ 0.68
GSK3AP49840 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GSK3AP49840 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GSK3AP49840 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GSK3AP49840 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GSK3AP49840 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GSK3AP49840 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GSK3AP49840 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GSK3AP49840 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
GSK3AP49840 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GSK3AP49840 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GSK3AP49840 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
GSK3AP49840 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GSK3AP49840 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
GSK3AP49840 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GSK3AP49840 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GSK3AP49840 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GSK3AP49840 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GSK3AP49840 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GSK3AP49840 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GSK3AP49840 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.27■□□□□ 0.68
GSK3AP49840 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms