Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC019171.1-201ENST00000601251 1056 ntBASIC19.51■□□□□ 0.71
SOX2P48431 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
SOX2P48431 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX2P48431 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.51■□□□□ 0.71
SOX2P48431 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX2P48431 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX2P48431 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX2P48431 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.5■□□□□ 0.71
SOX2P48431 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX2P48431 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX2P48431 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX2P48431 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX2P48431 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.5■□□□□ 0.71
SOX2P48431 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.5■□□□□ 0.71
SOX2P48431 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.5■□□□□ 0.71
SOX2P48431 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX2P48431 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SOX2P48431 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX2P48431 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.5■□□□□ 0.71
SOX2P48431 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SOX2P48431 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX2P48431 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
SOX2P48431 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX2P48431 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SOX2P48431 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SOX2P48431 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.49■□□□□ 0.71
SOX2P48431 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.49■□□□□ 0.71
SOX2P48431 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.49■□□□□ 0.71
SOX2P48431 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX2P48431 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.49■□□□□ 0.71
SOX2P48431 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX2P48431 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX2P48431 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
SOX2P48431 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.49■□□□□ 0.71
SOX2P48431 HSD17B1P1-201ENST00000590052 955 ntBASIC19.49■□□□□ 0.71
SOX2P48431 AF131216.4-201ENST00000638924 1588 ntBASIC19.49■□□□□ 0.71
SOX2P48431 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX2P48431 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SOX2P48431 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX2P48431 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX2P48431 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.48■□□□□ 0.71
SOX2P48431 BHLHE23-202ENST00000612929 1109 ntBASIC19.48■□□□□ 0.71
SOX2P48431 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX2P48431 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX2P48431 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SOX2P48431 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.48■□□□□ 0.71
SOX2P48431 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SOX2P48431 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SOX2P48431 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SOX2P48431 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.47■□□□□ 0.71
SOX2P48431 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX2P48431 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX2P48431 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX2P48431 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX2P48431 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.47■□□□□ 0.71
SOX2P48431 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.47■□□□□ 0.71
SOX2P48431 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SOX2P48431 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.47■□□□□ 0.71
SOX2P48431 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.47■□□□□ 0.71
SOX2P48431 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SOX2P48431 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SOX2P48431 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SOX2P48431 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SOX2P48431 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SOX2P48431 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.47■□□□□ 0.71
SOX2P48431 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SOX2P48431 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX2P48431 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX2P48431 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX2P48431 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SOX2P48431 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SOX2P48431 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX2P48431 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.46■□□□□ 0.71
SOX2P48431 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX2P48431 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SOX2P48431 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SOX2P48431 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SOX2P48431 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX2P48431 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.46■□□□□ 0.71
SOX2P48431 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX2P48431 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX2P48431 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX2P48431 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.45■□□□□ 0.7
SOX2P48431 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SOX2P48431 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SOX2P48431 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX2P48431 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX2P48431 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SOX2P48431 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SOX2P48431 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX2P48431 MIR4281-201ENST00000580852 62 ntBASIC19.45■□□□□ 0.7
SOX2P48431 THA1P-201ENST00000590384 1145 ntBASIC19.45■□□□□ 0.7
SOX2P48431 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX2P48431 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SOX2P48431 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.45■□□□□ 0.7
SOX2P48431 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX2P48431 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX2P48431 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SOX2P48431 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SOX2P48431 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms