Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
ATP6V1AP38606 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
ATP6V1AP38606 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ATP6V1AP38606 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
ATP6V1AP38606 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC28.68■■■□□ 2.18
ATP6V1AP38606 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC28.68■■■□□ 2.18
ATP6V1AP38606 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
ATP6V1AP38606 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
ATP6V1AP38606 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
ATP6V1AP38606 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC28.67■■■□□ 2.18
ATP6V1AP38606 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
ATP6V1AP38606 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
ATP6V1AP38606 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC28.67■■■□□ 2.18
ATP6V1AP38606 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ATP6V1AP38606 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC28.67■■■□□ 2.18
ATP6V1AP38606 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
ATP6V1AP38606 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
ATP6V1AP38606 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ATP6V1AP38606 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
ATP6V1AP38606 STX4-202ENST00000394998 1498 ntTSL 2 BASIC28.66■■■□□ 2.18
ATP6V1AP38606 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ATP6V1AP38606 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ATP6V1AP38606 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
ATP6V1AP38606 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
ATP6V1AP38606 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
ATP6V1AP38606 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
ATP6V1AP38606 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC28.66■■■□□ 2.18
ATP6V1AP38606 RAP2CP1-201ENST00000605103 478 ntBASIC28.66■■■□□ 2.18
ATP6V1AP38606 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
ATP6V1AP38606 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC28.66■■■□□ 2.18
ATP6V1AP38606 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ATP6V1AP38606 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC28.65■■■□□ 2.18
ATP6V1AP38606 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC28.65■■■□□ 2.18
ATP6V1AP38606 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ATP6V1AP38606 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ATP6V1AP38606 LINC01529-204ENST00000636474 1715 ntBASIC28.65■■■□□ 2.18
ATP6V1AP38606 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
ATP6V1AP38606 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
ATP6V1AP38606 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ATP6V1AP38606 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
ATP6V1AP38606 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
ATP6V1AP38606 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
ATP6V1AP38606 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
ATP6V1AP38606 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
ATP6V1AP38606 AC016769.1-201ENST00000409132 1010 ntBASIC28.64■■■□□ 2.18
ATP6V1AP38606 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC28.64■■■□□ 2.18
ATP6V1AP38606 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
ATP6V1AP38606 CDCA4P2-201ENST00000441182 718 ntBASIC28.64■■■□□ 2.18
ATP6V1AP38606 AC137761.2-201ENST00000561729 223 ntBASIC28.64■■■□□ 2.18
ATP6V1AP38606 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC28.64■■■□□ 2.18
ATP6V1AP38606 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC28.64■■■□□ 2.18
ATP6V1AP38606 AC145350.3-201ENST00000569033 163 ntBASIC28.64■■■□□ 2.18
ATP6V1AP38606 GALNS-213ENST00000569433 723 ntTSL 3 BASIC28.64■■■□□ 2.18
ATP6V1AP38606 AC144652.1-201ENST00000609974 1624 ntBASIC28.64■■■□□ 2.18
ATP6V1AP38606 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC28.63■■■□□ 2.17
ATP6V1AP38606 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ATP6V1AP38606 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC28.63■■■□□ 2.17
ATP6V1AP38606 MFF-208ENST00000409616 1247 ntTSL 5 BASIC28.63■■■□□ 2.17
ATP6V1AP38606 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC28.63■■■□□ 2.17
ATP6V1AP38606 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC28.63■■■□□ 2.17
ATP6V1AP38606 GXYLT1P5-201ENST00000614548 1189 ntBASIC28.63■■■□□ 2.17
ATP6V1AP38606 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
ATP6V1AP38606 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
ATP6V1AP38606 AC022211.4-201ENST00000625094 2161 ntBASIC28.62■■■□□ 2.17
ATP6V1AP38606 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
ATP6V1AP38606 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC28.62■■■□□ 2.17
ATP6V1AP38606 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC28.62■■■□□ 2.17
ATP6V1AP38606 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC28.62■■■□□ 2.17
ATP6V1AP38606 AC073111.5-205ENST00000641717 521 ntBASIC28.62■■■□□ 2.17
ATP6V1AP38606 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
ATP6V1AP38606 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ATP6V1AP38606 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ATP6V1AP38606 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ATP6V1AP38606 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC28.61■■■□□ 2.17
ATP6V1AP38606 RARA-203ENST00000394086 2008 ntTSL 2 BASIC28.61■■■□□ 2.17
ATP6V1AP38606 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC28.61■■■□□ 2.17
ATP6V1AP38606 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC28.61■■■□□ 2.17
ATP6V1AP38606 TPRG1LP1-201ENST00000598702 760 ntBASIC28.61■■■□□ 2.17
ATP6V1AP38606 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC28.61■■■□□ 2.17
ATP6V1AP38606 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ATP6V1AP38606 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
ATP6V1AP38606 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.6■■■□□ 2.17
ATP6V1AP38606 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC28.6■■■□□ 2.17
ATP6V1AP38606 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC28.6■■■□□ 2.17
ATP6V1AP38606 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
ATP6V1AP38606 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC28.6■■■□□ 2.17
ATP6V1AP38606 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC28.6■■■□□ 2.17
ATP6V1AP38606 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC28.6■■■□□ 2.17
ATP6V1AP38606 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ATP6V1AP38606 AP003733.4-201ENST00000623785 1697 ntBASIC28.6■■■□□ 2.17
ATP6V1AP38606 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ATP6V1AP38606 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC28.6■■■□□ 2.17
ATP6V1AP38606 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ATP6V1AP38606 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ATP6V1AP38606 STX7-201ENST00000367937 1090 ntTSL 5 BASIC28.59■■■□□ 2.17
ATP6V1AP38606 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
ATP6V1AP38606 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
ATP6V1AP38606 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC28.59■■■□□ 2.17
ATP6V1AP38606 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
ATP6V1AP38606 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC28.58■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms