Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CPS1P31327 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CPS1P31327 AC141586.4-201ENST00000624558 1573 ntBASIC31.93■■■□□ 2.7
CPS1P31327 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC31.93■■■□□ 2.7
CPS1P31327 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC31.93■■■□□ 2.7
CPS1P31327 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CPS1P31327 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CPS1P31327 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CPS1P31327 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC31.93■■■□□ 2.7
CPS1P31327 AL050303.2-201ENST00000619798 666 ntBASIC31.93■■■□□ 2.7
CPS1P31327 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC31.93■■■□□ 2.7
CPS1P31327 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CPS1P31327 FAM201B-201ENST00000458407 597 ntBASIC31.92■■■□□ 2.7
CPS1P31327 AC105233.4-201ENST00000642045 216 ntBASIC31.92■■■□□ 2.7
CPS1P31327 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CPS1P31327 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
CPS1P31327 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC31.91■■■□□ 2.7
CPS1P31327 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC31.91■■■□□ 2.7
CPS1P31327 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC31.91■■■□□ 2.7
CPS1P31327 TSPY6P-201ENST00000448518 926 ntBASIC31.91■■■□□ 2.7
CPS1P31327 AC010525.1-201ENST00000585559 441 ntBASIC31.91■■■□□ 2.7
CPS1P31327 AL121832.2-201ENST00000610979 668 ntBASIC31.91■■■□□ 2.7
CPS1P31327 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CPS1P31327 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CPS1P31327 MFF-208ENST00000409616 1247 ntTSL 5 BASIC31.9■■■□□ 2.7
CPS1P31327 KRT18P11-201ENST00000435214 1283 ntBASIC31.9■■■□□ 2.7
CPS1P31327 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC31.9■■■□□ 2.7
CPS1P31327 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
CPS1P31327 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC31.9■■■□□ 2.7
CPS1P31327 AC011767.1-201ENST00000617410 1153 ntBASIC31.9■■■□□ 2.7
CPS1P31327 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CPS1P31327 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CPS1P31327 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CPS1P31327 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CPS1P31327 SLC7A5P2-201ENST00000553010 536 ntBASIC31.9■■■□□ 2.7
CPS1P31327 KLF13-207ENST00000560473 489 ntTSL 3 BASIC31.9■■■□□ 2.7
CPS1P31327 MDK-213ENST00000617138 635 ntTSL 2 BASIC31.9■■■□□ 2.7
CPS1P31327 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CPS1P31327 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CPS1P31327 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
CPS1P31327 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CPS1P31327 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CPS1P31327 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC31.89■■■□□ 2.7
CPS1P31327 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CPS1P31327 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CPS1P31327 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC31.89■■■□□ 2.7
CPS1P31327 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CPS1P31327 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CPS1P31327 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CPS1P31327 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CPS1P31327 KRT19P1-201ENST00000405746 1186 ntBASIC31.88■■■□□ 2.69
CPS1P31327 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC31.88■■■□□ 2.69
CPS1P31327 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC31.88■■■□□ 2.69
CPS1P31327 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CPS1P31327 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CPS1P31327 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
CPS1P31327 AC069152.1-201ENST00000438030 544 ntBASIC31.87■■■□□ 2.69
CPS1P31327 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC31.87■■■□□ 2.69
CPS1P31327 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC31.87■■■□□ 2.69
CPS1P31327 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CPS1P31327 AC133637.1-201ENST00000624115 1537 ntBASIC31.87■■■□□ 2.69
CPS1P31327 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CPS1P31327 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC31.86■■■□□ 2.69
CPS1P31327 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CPS1P31327 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC31.86■■■□□ 2.69
CPS1P31327 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
CPS1P31327 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC31.86■■■□□ 2.69
CPS1P31327 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC31.86■■■□□ 2.69
CPS1P31327 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC31.85■■■□□ 2.69
CPS1P31327 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CPS1P31327 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CPS1P31327 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
CPS1P31327 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC31.85■■■□□ 2.69
CPS1P31327 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC31.85■■■□□ 2.69
CPS1P31327 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC31.85■■■□□ 2.69
CPS1P31327 DUX4L4-201ENST00000566884 1269 ntBASIC31.85■■■□□ 2.69
CPS1P31327 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CPS1P31327 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CPS1P31327 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC31.85■■■□□ 2.69
CPS1P31327 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC31.85■■■□□ 2.69
CPS1P31327 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC31.84■■■□□ 2.69
CPS1P31327 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC31.84■■■□□ 2.69
CPS1P31327 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CPS1P31327 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC31.84■■■□□ 2.69
CPS1P31327 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CPS1P31327 ALDH1A3-203ENST00000557963 1670 ntBASIC31.83■■■□□ 2.69
CPS1P31327 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC31.83■■■□□ 2.69
CPS1P31327 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CPS1P31327 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC31.83■■■□□ 2.69
CPS1P31327 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.69
CPS1P31327 HLA-L-211ENST00000482052 1765 ntBASIC31.82■■■□□ 2.68
CPS1P31327 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CPS1P31327 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CPS1P31327 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CPS1P31327 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CPS1P31327 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CPS1P31327 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
CPS1P31327 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
CPS1P31327 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC31.82■■■□□ 2.68
CPS1P31327 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms