Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.26■□□□□ 0.67
ACKR3P25106 MTDHP2-201ENST00000601468 714 ntBASIC19.26■□□□□ 0.67
ACKR3P25106 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACKR3P25106 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ACKR3P25106 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACKR3P25106 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.26■□□□□ 0.67
ACKR3P25106 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.25■□□□□ 0.67
ACKR3P25106 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.25■□□□□ 0.67
ACKR3P25106 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACKR3P25106 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACKR3P25106 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACKR3P25106 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ACKR3P25106 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
ACKR3P25106 TSPY9P-201ENST00000440215 945 ntBASIC19.25■□□□□ 0.67
ACKR3P25106 TSPY11P-201ENST00000442607 1045 ntBASIC19.25■□□□□ 0.67
ACKR3P25106 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACKR3P25106 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACKR3P25106 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACKR3P25106 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.25■□□□□ 0.67
ACKR3P25106 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ACKR3P25106 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.25■□□□□ 0.67
ACKR3P25106 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ACKR3P25106 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ACKR3P25106 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.24■□□□□ 0.67
ACKR3P25106 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ACKR3P25106 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.24■□□□□ 0.67
ACKR3P25106 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.24■□□□□ 0.67
ACKR3P25106 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ACKR3P25106 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.24■□□□□ 0.67
ACKR3P25106 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.24■□□□□ 0.67
ACKR3P25106 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ACKR3P25106 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.24■□□□□ 0.67
ACKR3P25106 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ACKR3P25106 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ACKR3P25106 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ACKR3P25106 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.23■□□□□ 0.67
ACKR3P25106 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.23■□□□□ 0.67
ACKR3P25106 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.23■□□□□ 0.67
ACKR3P25106 AC010997.5-201ENST00000609182 354 ntBASIC19.23■□□□□ 0.67
ACKR3P25106 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACKR3P25106 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACKR3P25106 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACKR3P25106 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ACKR3P25106 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.22■□□□□ 0.67
ACKR3P25106 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ACKR3P25106 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACKR3P25106 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.22■□□□□ 0.67
ACKR3P25106 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ACKR3P25106 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACKR3P25106 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACKR3P25106 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.22■□□□□ 0.67
ACKR3P25106 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACKR3P25106 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ACKR3P25106 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACKR3P25106 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.22■□□□□ 0.67
ACKR3P25106 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACKR3P25106 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ACKR3P25106 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACKR3P25106 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.22■□□□□ 0.67
ACKR3P25106 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ACKR3P25106 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACKR3P25106 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACKR3P25106 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ACKR3P25106 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ACKR3P25106 AL117328.2-201ENST00000624617 1940 ntBASIC19.21■□□□□ 0.67
ACKR3P25106 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.21■□□□□ 0.67
ACKR3P25106 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ACKR3P25106 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ACKR3P25106 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ACKR3P25106 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ACKR3P25106 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ACKR3P25106 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.21■□□□□ 0.67
ACKR3P25106 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ACKR3P25106 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ACKR3P25106 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ACKR3P25106 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.2■□□□□ 0.66
ACKR3P25106 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.2■□□□□ 0.66
ACKR3P25106 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.2■□□□□ 0.66
ACKR3P25106 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ACKR3P25106 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ACKR3P25106 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ACKR3P25106 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ACKR3P25106 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.19■□□□□ 0.66
ACKR3P25106 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ACKR3P25106 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ACKR3P25106 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.19■□□□□ 0.66
ACKR3P25106 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ACKR3P25106 UNC93B8-201ENST00000511903 705 ntBASIC19.19■□□□□ 0.66
ACKR3P25106 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ACKR3P25106 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ACKR3P25106 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.19■□□□□ 0.66
ACKR3P25106 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ACKR3P25106 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ACKR3P25106 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.19■□□□□ 0.66
ACKR3P25106 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ACKR3P25106 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ACKR3P25106 AC009102.2-201ENST00000606772 1639 ntBASIC19.18■□□□□ 0.66
ACKR3P25106 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ACKR3P25106 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ACKR3P25106 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms