Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.23■□□□□ 0.99
PRPH2P23942 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRPH2P23942 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PRPH2P23942 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRPH2P23942 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PRPH2P23942 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRPH2P23942 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRPH2P23942 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.22■□□□□ 0.99
PRPH2P23942 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRPH2P23942 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRPH2P23942 RARRES2P1-201ENST00000474487 481 ntBASIC21.22■□□□□ 0.99
PRPH2P23942 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.22■□□□□ 0.99
PRPH2P23942 MTDHP2-201ENST00000601468 714 ntBASIC21.22■□□□□ 0.99
PRPH2P23942 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.22■□□□□ 0.99
PRPH2P23942 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRPH2P23942 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRPH2P23942 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PRPH2P23942 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
PRPH2P23942 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRPH2P23942 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRPH2P23942 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PRPH2P23942 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRPH2P23942 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRPH2P23942 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PRPH2P23942 AC009086.3-201ENST00000623486 1008 ntBASIC21.21■□□□□ 0.99
PRPH2P23942 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.21■□□□□ 0.99
PRPH2P23942 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRPH2P23942 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRPH2P23942 AC009102.2-201ENST00000606772 1639 ntBASIC21.21■□□□□ 0.99
PRPH2P23942 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRPH2P23942 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRPH2P23942 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PRPH2P23942 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRPH2P23942 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.2■□□□□ 0.98
PRPH2P23942 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PRPH2P23942 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRPH2P23942 AC139530.1-201ENST00000575312 1977 ntBASIC21.2■□□□□ 0.98
PRPH2P23942 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.2■□□□□ 0.98
PRPH2P23942 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRPH2P23942 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.2■□□□□ 0.98
PRPH2P23942 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PRPH2P23942 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRPH2P23942 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRPH2P23942 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRPH2P23942 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PRPH2P23942 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.19■□□□□ 0.98
PRPH2P23942 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PRPH2P23942 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPH2P23942 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPH2P23942 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPH2P23942 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.19■□□□□ 0.98
PRPH2P23942 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPH2P23942 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPH2P23942 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPH2P23942 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPH2P23942 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPH2P23942 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPH2P23942 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRPH2P23942 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPH2P23942 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.18■□□□□ 0.98
PRPH2P23942 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.18■□□□□ 0.98
PRPH2P23942 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPH2P23942 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
PRPH2P23942 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPH2P23942 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PRPH2P23942 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.18■□□□□ 0.98
PRPH2P23942 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PRPH2P23942 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPH2P23942 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPH2P23942 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
PRPH2P23942 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPH2P23942 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
PRPH2P23942 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPH2P23942 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPH2P23942 LINC00565-201ENST00000562710 2331 ntBASIC21.17■□□□□ 0.98
PRPH2P23942 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPH2P23942 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PRPH2P23942 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.17■□□□□ 0.98
PRPH2P23942 AC239859.2-201ENST00000444165 318 ntBASIC21.17■□□□□ 0.98
PRPH2P23942 AC009299.2-201ENST00000482477 511 ntBASIC21.17■□□□□ 0.98
PRPH2P23942 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPH2P23942 AC010997.5-201ENST00000609182 354 ntBASIC21.17■□□□□ 0.98
PRPH2P23942 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.17■□□□□ 0.98
PRPH2P23942 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPH2P23942 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPH2P23942 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPH2P23942 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPH2P23942 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
PRPH2P23942 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPH2P23942 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.16■□□□□ 0.98
PRPH2P23942 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPH2P23942 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PRPH2P23942 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.16■□□□□ 0.98
PRPH2P23942 C17orf82-201ENST00000623772 1530 ntBASIC21.16■□□□□ 0.98
PRPH2P23942 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPH2P23942 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPH2P23942 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.16■□□□□ 0.98
PRPH2P23942 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.16■□□□□ 0.98
PRPH2P23942 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPH2P23942 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms