Protein–RNA interactions for Protein: P22147

XRN1, 5'-3' exoribonuclease 1, yeastyeast

Known RBP Predictions only

Length 1,528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XRN1P22147 RPL34AYER056C-A 366 nt5.84□□□□□ -1.47
XRN1P22147 BMH1YER177W 804 nt5.84□□□□□ -1.47
XRN1P22147 ATG8YBL078C 354 nt5.84□□□□□ -1.47
XRN1P22147 FSH3YOR280C 801 nt5.84□□□□□ -1.47
XRN1P22147 UBX5YDR330W 1503 nt5.84□□□□□ -1.47
XRN1P22147 MDR1YGR100W 2853 nt5.84□□□□□ -1.47
XRN1P22147 YGR125WYGR125W 3111 nt5.84□□□□□ -1.47
XRN1P22147 NRM1YNR009W 750 nt5.84□□□□□ -1.48
XRN1P22147 YCL075WYCL075W 441 nt5.83□□□□□ -1.48
XRN1P22147 tV(CAC)DtV(CAC)D 73 nt5.83□□□□□ -1.48
XRN1P22147 tV(CAC)HtV(CAC)H 73 nt5.83□□□□□ -1.48
XRN1P22147 YJL218WYJL218W 591 nt5.83□□□□□ -1.48
XRN1P22147 CHD1YER164W 4407 nt5.82□□□□□ -1.48
XRN1P22147 VMS1YDR049W 1899 nt5.82□□□□□ -1.48
XRN1P22147 VAC8YEL013W 1737 nt5.82□□□□□ -1.48
XRN1P22147 MSR1YHR091C 1932 nt5.82□□□□□ -1.48
XRN1P22147 YER034WYER034W 558 nt5.82□□□□□ -1.48
XRN1P22147 YGL218WYGL218W 651 nt5.82□□□□□ -1.48
XRN1P22147 APC9YLR102C 798 nt5.82□□□□□ -1.48
XRN1P22147 PKH1YDR490C 2301 nt5.81□□□□□ -1.48
XRN1P22147 FLC3YGL139W 2409 nt5.81□□□□□ -1.48
XRN1P22147 KIC1YHR102W 3243 nt5.81□□□□□ -1.48
XRN1P22147 PEX7YDR142C 1128 nt5.81□□□□□ -1.48
XRN1P22147 tF(GAA)DtF(GAA)D 73 nt5.81□□□□□ -1.48
XRN1P22147 tF(GAA)NtF(GAA)N 73 nt5.81□□□□□ -1.48
XRN1P22147 VTA1YLR181C 993 nt5.81□□□□□ -1.48
XRN1P22147 UPC2YDR213W 2742 nt5.81□□□□□ -1.48
XRN1P22147 THI7YLR237W 1797 nt5.8□□□□□ -1.48
XRN1P22147 DBP10YDL031W 2988 nt5.8□□□□□ -1.48
XRN1P22147 TRM1YDR120C 1713 nt5.8□□□□□ -1.48
XRN1P22147 ERJ5YFR041C 888 nt5.79□□□□□ -1.48
XRN1P22147 REC104YHR157W 549 nt5.79□□□□□ -1.48
XRN1P22147 DIP2YLR129W 2832 nt5.78□□□□□ -1.48
XRN1P22147 YTM1YOR272W 1383 nt5.78□□□□□ -1.48
XRN1P22147 SLI1YGR212W 1407 nt5.78□□□□□ -1.48
XRN1P22147 IML2YJL082W 2196 nt5.78□□□□□ -1.48
XRN1P22147 HOM2YDR158W 1098 nt5.78□□□□□ -1.48
XRN1P22147 YEL057CYEL057C 702 nt5.78□□□□□ -1.48
XRN1P22147 STP22YCL008C 1158 nt5.78□□□□□ -1.48
XRN1P22147 YPP1YGR198W 2454 nt5.78□□□□□ -1.48
XRN1P22147 EXO5YBR163W 1758 nt5.77□□□□□ -1.49
XRN1P22147 YDR444WYDR444W 2064 nt5.77□□□□□ -1.49
XRN1P22147 COA4YLR218C 453 nt5.77□□□□□ -1.49
XRN1P22147 MCK1YNL307C 1128 nt5.77□□□□□ -1.49
XRN1P22147 CDC21YOR074C 915 nt5.77□□□□□ -1.49
XRN1P22147 MSB2YGR014W 3921 nt5.77□□□□□ -1.49
XRN1P22147 CDS1YBR029C 1374 nt5.77□□□□□ -1.49
XRN1P22147 VBA2YBR293W 1425 nt5.77□□□□□ -1.49
XRN1P22147 RNH203YLR154C 333 nt5.76□□□□□ -1.49
XRN1P22147 VBA1YMR088C 1689 nt5.76□□□□□ -1.49
XRN1P22147 MIS1YBR084W 2928 nt5.75□□□□□ -1.49
XRN1P22147 COX23YHR116W 456 nt5.75□□□□□ -1.49
XRN1P22147 snR32snR32 188 nt5.75□□□□□ -1.49
XRN1P22147 EKI1YDR147W 1605 nt5.74□□□□□ -1.49
XRN1P22147 RPN2YIL075C 2838 nt5.74□□□□□ -1.49
XRN1P22147 MRPL16YBL038W 699 nt5.74□□□□□ -1.49
XRN1P22147 YGR107WYGR107W 450 nt5.72□□□□□ -1.49
XRN1P22147 YHL034W-AYHL034W-A 462 nt5.72□□□□□ -1.49
XRN1P22147 PMC1YGL006W 3522 nt5.72□□□□□ -1.49
XRN1P22147 TOS3YGL179C 1683 nt5.71□□□□□ -1.49
XRN1P22147 APE2YKL157W 2859 nt5.71□□□□□ -1.49
XRN1P22147 TAF8YML114C 1533 nt5.71□□□□□ -1.5
XRN1P22147 MED4YOR174W 855 nt5.71□□□□□ -1.5
XRN1P22147 HOM3YER052C 1584 nt5.71□□□□□ -1.5
XRN1P22147 RPL15AYLR029C 615 nt5.7□□□□□ -1.5
XRN1P22147 YBR137WYBR137W 540 nt5.7□□□□□ -1.5
XRN1P22147 VID28YIL017C 2766 nt5.7□□□□□ -1.5
XRN1P22147 UBP7YIL156W 3216 nt5.7□□□□□ -1.5
XRN1P22147 AVT1YJR001W 1809 nt5.69□□□□□ -1.5
XRN1P22147 HSP42YDR171W 1128 nt5.69□□□□□ -1.5
XRN1P22147 ECM16YMR128W 3804 nt5.69□□□□□ -1.5
XRN1P22147 RIM11YMR139W 1113 nt5.69□□□□□ -1.5
XRN1P22147 GPI12YMR281W 915 nt5.69□□□□□ -1.5
XRN1P22147 YND1YER005W 1893 nt5.69□□□□□ -1.5
XRN1P22147 SAS10YDL153C 1833 nt5.69□□□□□ -1.5
XRN1P22147 IME4YGL192W 1803 nt5.69□□□□□ -1.5
XRN1P22147 NKP1YDR383C 717 nt5.69□□□□□ -1.5
XRN1P22147 YJL175WYJL175W 513 nt5.69□□□□□ -1.5
XRN1P22147 USB1YLR132C 873 nt5.69□□□□□ -1.5
XRN1P22147 RPS9BYBR189W 588 nt5.69□□□□□ -1.5
XRN1P22147 SFI1YLL003W 2841 nt5.68□□□□□ -1.5
XRN1P22147 COS8YHL048W 1146 nt5.68□□□□□ -1.5
XRN1P22147 BOI2YER114C 3123 nt5.68□□□□□ -1.5
XRN1P22147 ECM32YER176W 3366 nt5.67□□□□□ -1.5
XRN1P22147 MRH1YDR033W 963 nt5.67□□□□□ -1.5
XRN1P22147 ARC15YIL062C 465 nt5.67□□□□□ -1.5
XRN1P22147 YPL216WYPL216W 3309 nt5.66□□□□□ -1.5
XRN1P22147 SYT1YPR095C 3681 nt5.66□□□□□ -1.5
XRN1P22147 YGL108CYGL108C 423 nt5.66□□□□□ -1.5
XRN1P22147 UBA2YDR390C 1911 nt5.65□□□□□ -1.5
XRN1P22147 POL3YDL102W 3294 nt5.65□□□□□ -1.5
XRN1P22147 tK(UUU)DtK(UUU)D 73 nt5.65□□□□□ -1.5
XRN1P22147 tK(UUU)G1tK(UUU)G1 73 nt5.65□□□□□ -1.5
XRN1P22147 tK(UUU)G2tK(UUU)G2 73 nt5.65□□□□□ -1.5
XRN1P22147 tK(UUU)KtK(UUU)K 73 nt5.65□□□□□ -1.5
XRN1P22147 tK(UUU)LtK(UUU)L 73 nt5.65□□□□□ -1.5
XRN1P22147 tK(UUU)OtK(UUU)O 73 nt5.65□□□□□ -1.5
XRN1P22147 tK(UUU)PtK(UUU)P 73 nt5.65□□□□□ -1.5
XRN1P22147 PPX1YHR201C 1194 nt5.65□□□□□ -1.5
XRN1P22147 NIP7YPL211W 546 nt5.65□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 25.7 ms