Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 MFF-208ENST00000409616 1247 ntTSL 5 BASIC27.72■■■□□ 2.03
COL11A2P13942 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC27.72■■■□□ 2.03
COL11A2P13942 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC27.72■■■□□ 2.03
COL11A2P13942 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL11A2P13942 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC27.72■■■□□ 2.03
COL11A2P13942 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL11A2P13942 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC27.72■■■□□ 2.03
COL11A2P13942 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC27.72■■■□□ 2.03
COL11A2P13942 AC004854.2-201ENST00000608450 1441 ntBASIC27.72■■■□□ 2.03
COL11A2P13942 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC27.71■■■□□ 2.03
COL11A2P13942 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL11A2P13942 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL11A2P13942 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL11A2P13942 CROCCP5-201ENST00000436658 830 ntBASIC27.71■■■□□ 2.03
COL11A2P13942 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC27.71■■■□□ 2.03
COL11A2P13942 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
COL11A2P13942 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
COL11A2P13942 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
COL11A2P13942 AL355802.2-201ENST00000402069 882 ntBASIC27.7■■■□□ 2.03
COL11A2P13942 AC026185.1-201ENST00000445748 174 ntBASIC27.7■■■□□ 2.03
COL11A2P13942 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.03
COL11A2P13942 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
COL11A2P13942 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
COL11A2P13942 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.7■■■□□ 2.02
COL11A2P13942 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
COL11A2P13942 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
COL11A2P13942 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
COL11A2P13942 PPP1R14BP3-201ENST00000509033 445 ntBASIC27.7■■■□□ 2.02
COL11A2P13942 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL11A2P13942 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
COL11A2P13942 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC27.69■■■□□ 2.02
COL11A2P13942 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
COL11A2P13942 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL11A2P13942 GAS2L1P2-201ENST00000436355 1356 ntBASIC27.68■■■□□ 2.02
COL11A2P13942 DUX4L4-201ENST00000566884 1269 ntBASIC27.68■■■□□ 2.02
COL11A2P13942 AP004607.4-201ENST00000530158 1459 ntBASIC27.68■■■□□ 2.02
COL11A2P13942 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.68■■■□□ 2.02
COL11A2P13942 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
COL11A2P13942 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC27.67■■■□□ 2.02
COL11A2P13942 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL11A2P13942 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC27.67■■■□□ 2.02
COL11A2P13942 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
COL11A2P13942 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.66■■■□□ 2.02
COL11A2P13942 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL11A2P13942 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC27.66■■■□□ 2.02
COL11A2P13942 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL11A2P13942 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL11A2P13942 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL11A2P13942 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL11A2P13942 AC145676.1-201ENST00000514988 2004 ntBASIC27.65■■■□□ 2.02
COL11A2P13942 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC27.65■■■□□ 2.02
COL11A2P13942 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC27.65■■■□□ 2.02
COL11A2P13942 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC27.65■■■□□ 2.02
COL11A2P13942 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.65■■■□□ 2.02
COL11A2P13942 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL11A2P13942 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC27.65■■■□□ 2.02
COL11A2P13942 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
COL11A2P13942 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC27.65■■■□□ 2.02
COL11A2P13942 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.65■■■□□ 2.02
COL11A2P13942 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL11A2P13942 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
COL11A2P13942 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
COL11A2P13942 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL11A2P13942 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL11A2P13942 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL11A2P13942 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL11A2P13942 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC27.64■■■□□ 2.02
COL11A2P13942 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC27.64■■■□□ 2.02
COL11A2P13942 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL11A2P13942 COX20-201ENST00000366528 568 ntTSL 2 BASIC27.64■■■□□ 2.01
COL11A2P13942 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC27.64■■■□□ 2.01
COL11A2P13942 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
COL11A2P13942 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC27.63■■■□□ 2.01
COL11A2P13942 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL11A2P13942 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
COL11A2P13942 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
COL11A2P13942 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
COL11A2P13942 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
COL11A2P13942 BID-214ENST00000617586 542 ntTSL 5 BASIC27.63■■■□□ 2.01
COL11A2P13942 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
COL11A2P13942 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC27.62■■■□□ 2.01
COL11A2P13942 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC27.62■■■□□ 2.01
COL11A2P13942 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
COL11A2P13942 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
COL11A2P13942 AC144652.1-201ENST00000609974 1624 ntBASIC27.62■■■□□ 2.01
COL11A2P13942 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.62■■■□□ 2.01
COL11A2P13942 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
COL11A2P13942 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
COL11A2P13942 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
COL11A2P13942 MAP2K4P1-201ENST00000438453 1195 ntBASIC27.62■■■□□ 2.01
COL11A2P13942 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC27.62■■■□□ 2.01
COL11A2P13942 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
COL11A2P13942 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
COL11A2P13942 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
COL11A2P13942 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL11A2P13942 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC27.61■■■□□ 2.01
COL11A2P13942 FP325331.1-202ENST00000623531 1380 ntBASIC27.61■■■□□ 2.01
COL11A2P13942 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL11A2P13942 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL11A2P13942 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms