Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 ECEL1P1-201ENST00000373592 1742 ntBASIC18.85■□□□□ 0.61
ZNF728P0DKX0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF728P0DKX0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF728P0DKX0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF728P0DKX0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ZNF728P0DKX0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF728P0DKX0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ZNF728P0DKX0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
ZNF728P0DKX0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
ZNF728P0DKX0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
ZNF728P0DKX0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF728P0DKX0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.84■□□□□ 0.61
ZNF728P0DKX0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF728P0DKX0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF728P0DKX0 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.84■□□□□ 0.61
ZNF728P0DKX0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF728P0DKX0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF728P0DKX0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF728P0DKX0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 MIR6722-201ENST00000617286 78 ntBASIC18.82■□□□□ 0.6
ZNF728P0DKX0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 ALDH1A3-203ENST00000557963 1670 ntBASIC18.82■□□□□ 0.6
ZNF728P0DKX0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF728P0DKX0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 TSPY9P-201ENST00000440215 945 ntBASIC18.81■□□□□ 0.6
ZNF728P0DKX0 TSPY11P-201ENST00000442607 1045 ntBASIC18.81■□□□□ 0.6
ZNF728P0DKX0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 MTDHP2-201ENST00000601468 714 ntBASIC18.81■□□□□ 0.6
ZNF728P0DKX0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ZNF728P0DKX0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ZNF728P0DKX0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
ZNF728P0DKX0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ZNF728P0DKX0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF728P0DKX0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.8■□□□□ 0.6
ZNF728P0DKX0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF728P0DKX0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF728P0DKX0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF728P0DKX0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms