Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 PIM1YBL022C 3402 nt3.7□□□□□ -1.82
RPL40BP0CH09 FZO1YBR179C 2568 nt3.7□□□□□ -1.82
RPL40BP0CH09 GCR2YNL199C 1605 nt3.7□□□□□ -1.82
RPL40BP0CH09 YDL094CYDL094C 510 nt3.7□□□□□ -1.82
RPL40BP0CH09 HSP42YDR171W 1128 nt3.7□□□□□ -1.82
RPL40BP0CH09 PWR1PWR1 941 nt3.7□□□□□ -1.82
RPL40BP0CH09 RSF2YJR127C 4143 nt3.7□□□□□ -1.82
RPL40BP0CH09 KRS1YDR037W 1776 nt3.7□□□□□ -1.82
RPL40BP0CH09 YPP1YGR198W 2454 nt3.7□□□□□ -1.82
RPL40BP0CH09 VMA1YDL185W 3216 nt3.7□□□□□ -1.82
RPL40BP0CH09 APC11YDL008W 498 nt3.69□□□□□ -1.82
RPL40BP0CH09 MRP4YHL004W 1185 nt3.69□□□□□ -1.82
RPL40BP0CH09 YOR387CYOR387C 621 nt3.69□□□□□ -1.82
RPL40BP0CH09 TIM12YBR091C 330 nt3.69□□□□□ -1.82
RPL40BP0CH09 SRB6YBR253W 366 nt3.69□□□□□ -1.82
RPL40BP0CH09 TPA1YER049W 1935 nt3.69□□□□□ -1.82
RPL40BP0CH09 SSA2YLL024C 1920 nt3.69□□□□□ -1.82
RPL40BP0CH09 FAS2YPL231W 5664 nt3.69□□□□□ -1.82
RPL40BP0CH09 SRO7YPR032W 3102 nt3.69□□□□□ -1.82
RPL40BP0CH09 SUM1YDR310C 3189 nt3.69□□□□□ -1.82
RPL40BP0CH09 MPP10YJR002W 1782 nt3.68□□□□□ -1.82
RPL40BP0CH09 MDM34YGL219C 1380 nt3.68□□□□□ -1.82
RPL40BP0CH09 RPS11AYDR025W 471 nt3.68□□□□□ -1.82
RPL40BP0CH09 PPX1YHR201C 1194 nt3.68□□□□□ -1.82
RPL40BP0CH09 AHP1YLR109W 531 nt3.68□□□□□ -1.82
RPL40BP0CH09 SGT1YOR057W 1188 nt3.68□□□□□ -1.82
RPL40BP0CH09 ARX1YDR101C 1782 nt3.68□□□□□ -1.82
RPL40BP0CH09 ATG2YNL242W 4779 nt3.68□□□□□ -1.82
RPL40BP0CH09 CDC14YFR028C 1656 nt3.68□□□□□ -1.82
RPL40BP0CH09 LOH1YJL038C 660 nt3.67□□□□□ -1.82
RPL40BP0CH09 MBB1YJL199C 327 nt3.67□□□□□ -1.82
RPL40BP0CH09 RAD27YKL113C 1149 nt3.67□□□□□ -1.82
RPL40BP0CH09 YMR135W-AYMR135W-A 534 nt3.67□□□□□ -1.82
RPL40BP0CH09 GPI13YLL031C 3054 nt3.67□□□□□ -1.82
RPL40BP0CH09 VPS53YJL029C 2469 nt3.66□□□□□ -1.82
RPL40BP0CH09 VAS1YGR094W 3315 nt3.66□□□□□ -1.82
RPL40BP0CH09 RPL24AYGL031C 468 nt3.66□□□□□ -1.82
RPL40BP0CH09 FOL2YGR267C 732 nt3.66□□□□□ -1.82
RPL40BP0CH09 YIL171WYIL171W 330 nt3.66□□□□□ -1.82
RPL40BP0CH09 OAR1YKL055C 837 nt3.66□□□□□ -1.82
RPL40BP0CH09 YKR104WYKR104W 921 nt3.66□□□□□ -1.82
RPL40BP0CH09 IMP2YMR035W 534 nt3.66□□□□□ -1.82
RPL40BP0CH09 DBP3YGL078C 1572 nt3.66□□□□□ -1.82
RPL40BP0CH09 SNF2YOR290C 5112 nt3.65□□□□□ -1.82
RPL40BP0CH09 LOS1YKL205W 3303 nt3.65□□□□□ -1.82
RPL40BP0CH09 HFA1YMR207C 6372 nt3.65□□□□□ -1.82
RPL40BP0CH09 LCB2YDR062W 1686 nt3.65□□□□□ -1.82
RPL40BP0CH09 PRP9YDL030W 1593 nt3.65□□□□□ -1.82
RPL40BP0CH09 tQ(UUG)CtQ(UUG)C 72 nt3.65□□□□□ -1.83
RPL40BP0CH09 tQ(UUG)D1tQ(UUG)D1 72 nt3.65□□□□□ -1.83
RPL40BP0CH09 tQ(UUG)D2tQ(UUG)D2 72 nt3.65□□□□□ -1.83
RPL40BP0CH09 tQ(UUG)D3tQ(UUG)D3 72 nt3.65□□□□□ -1.83
RPL40BP0CH09 tQ(UUG)E1tQ(UUG)E1 72 nt3.65□□□□□ -1.83
RPL40BP0CH09 tQ(UUG)HtQ(UUG)H 72 nt3.65□□□□□ -1.83
RPL40BP0CH09 tQ(UUG)LtQ(UUG)L 72 nt3.65□□□□□ -1.83
RPL40BP0CH09 RDN5-1RDN5-1 121 nt3.65□□□□□ -1.83
RPL40BP0CH09 COX19YLL018C-A 297 nt3.65□□□□□ -1.83
RPL40BP0CH09 RDN5-6RDN5-6 121 nt3.65□□□□□ -1.83
RPL40BP0CH09 SEA4YBL104C 3117 nt3.65□□□□□ -1.83
RPL40BP0CH09 MRPL7YDR237W 879 nt3.64□□□□□ -1.83
RPL40BP0CH09 GTF1YGR102C 552 nt3.64□□□□□ -1.83
RPL40BP0CH09 ARC15YIL062C 465 nt3.64□□□□□ -1.83
RPL40BP0CH09 YLR049CYLR049C 1287 nt3.64□□□□□ -1.83
RPL40BP0CH09 SIW14YNL032W 846 nt3.64□□□□□ -1.83
RPL40BP0CH09 STP22YCL008C 1158 nt3.64□□□□□ -1.83
RPL40BP0CH09 FAR8YMR029C 1572 nt3.63□□□□□ -1.83
RPL40BP0CH09 RPO21YDL140C 5202 nt3.63□□□□□ -1.83
RPL40BP0CH09 YBR225WYBR225W 2703 nt3.63□□□□□ -1.83
RPL40BP0CH09 SPT15YER148W 723 nt3.63□□□□□ -1.83
RPL40BP0CH09 YGL199CYGL199C 471 nt3.63□□□□□ -1.83
RPL40BP0CH09 YHR193C-AYHR193C-A 375 nt3.63□□□□□ -1.83
RPL40BP0CH09 GCD14YJL125C 1152 nt3.63□□□□□ -1.83
RPL40BP0CH09 JJJ3YJR097W 519 nt3.63□□□□□ -1.83
RPL40BP0CH09 SHE1YBL031W 1017 nt3.63□□□□□ -1.83
RPL40BP0CH09 VAC8YEL013W 1737 nt3.63□□□□□ -1.83
RPL40BP0CH09 MNN1YER001W 2289 nt3.63□□□□□ -1.83
RPL40BP0CH09 TPO2YGR138C 1845 nt3.63□□□□□ -1.83
RPL40BP0CH09 PFK26YIL107C 2484 nt3.62□□□□□ -1.83
RPL40BP0CH09 MAP1YLR244C 1164 nt3.62□□□□□ -1.83
RPL40BP0CH09 YMR114CYMR114C 1107 nt3.62□□□□□ -1.83
RPL40BP0CH09 CMK1YFR014C 1341 nt3.62□□□□□ -1.83
RPL40BP0CH09 PCL10YGL134W 1302 nt3.62□□□□□ -1.83
RPL40BP0CH09 ECM7YLR443W 1347 nt3.62□□□□□ -1.83
RPL40BP0CH09 CDS1YBR029C 1374 nt3.62□□□□□ -1.83
RPL40BP0CH09 BRE4YDL231C 3378 nt3.62□□□□□ -1.83
RPL40BP0CH09 CHK1YBR274W 1584 nt3.61□□□□□ -1.83
RPL40BP0CH09 MRH1YDR033W 963 nt3.61□□□□□ -1.83
RPL40BP0CH09 RNH203YLR154C 333 nt3.61□□□□□ -1.83
RPL40BP0CH09 YLR374CYLR374C 390 nt3.61□□□□□ -1.83
RPL40BP0CH09 IMP4YNL075W 873 nt3.61□□□□□ -1.83
RPL40BP0CH09 SUI1YNL244C 327 nt3.61□□□□□ -1.83
RPL40BP0CH09 FSH3YOR280C 801 nt3.61□□□□□ -1.83
RPL40BP0CH09 FDH1YOR388C 1131 nt3.61□□□□□ -1.83
RPL40BP0CH09 FDH2YPL275W 711 nt3.61□□□□□ -1.83
RPL40BP0CH09 PPQ1YPL179W 1650 nt3.61□□□□□ -1.83
RPL40BP0CH09 RPO31YOR116C 4383 nt3.61□□□□□ -1.83
RPL40BP0CH09 PTA1YAL043C 2358 nt3.61□□□□□ -1.83
RPL40BP0CH09 HOS2YGL194C 1359 nt3.61□□□□□ -1.83
RPL40BP0CH09 DSF2YBR007C 2211 nt3.6□□□□□ -1.83
RPL40BP0CH09 SAP155YFR040W 3009 nt3.6□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 16 ms