Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
HOXC6P09630 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
HOXC6P09630 AC020928.2-201ENST00000588717 2197 ntBASIC25.39■■□□□ 1.65
HOXC6P09630 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.39■■□□□ 1.65
HOXC6P09630 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
HOXC6P09630 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC25.38■■□□□ 1.65
HOXC6P09630 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.38■■□□□ 1.65
HOXC6P09630 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.38■■□□□ 1.65
HOXC6P09630 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.38■■□□□ 1.65
HOXC6P09630 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
HOXC6P09630 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
HOXC6P09630 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
HOXC6P09630 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HOXC6P09630 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
HOXC6P09630 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.38■■□□□ 1.65
HOXC6P09630 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
HOXC6P09630 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
HOXC6P09630 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
HOXC6P09630 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HOXC6P09630 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
HOXC6P09630 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.37■■□□□ 1.65
HOXC6P09630 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
HOXC6P09630 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.37■■□□□ 1.65
HOXC6P09630 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HOXC6P09630 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.37■■□□□ 1.65
HOXC6P09630 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HOXC6P09630 DENND3-207ENST00000518347 850 ntTSL 2 BASIC25.37■■□□□ 1.65
HOXC6P09630 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.37■■□□□ 1.65
HOXC6P09630 AC105233.4-201ENST00000642045 216 ntBASIC25.37■■□□□ 1.65
HOXC6P09630 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
HOXC6P09630 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
HOXC6P09630 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
HOXC6P09630 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
HOXC6P09630 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
HOXC6P09630 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.36■■□□□ 1.65
HOXC6P09630 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
HOXC6P09630 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.36■■□□□ 1.65
HOXC6P09630 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
HOXC6P09630 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.36■■□□□ 1.65
HOXC6P09630 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.36■■□□□ 1.65
HOXC6P09630 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
HOXC6P09630 AC022211.4-201ENST00000625094 2161 ntBASIC25.35■■□□□ 1.65
HOXC6P09630 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HOXC6P09630 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HOXC6P09630 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
HOXC6P09630 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HOXC6P09630 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.35■■□□□ 1.65
HOXC6P09630 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.35■■□□□ 1.65
HOXC6P09630 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
HOXC6P09630 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
HOXC6P09630 AC006015.1-201ENST00000429970 570 ntBASIC25.35■■□□□ 1.65
HOXC6P09630 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
HOXC6P09630 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.35■■□□□ 1.65
HOXC6P09630 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HOXC6P09630 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
HOXC6P09630 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.34■■□□□ 1.65
HOXC6P09630 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HOXC6P09630 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.34■■□□□ 1.65
HOXC6P09630 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
HOXC6P09630 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HOXC6P09630 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.34■■□□□ 1.65
HOXC6P09630 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.34■■□□□ 1.65
HOXC6P09630 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
HOXC6P09630 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
HOXC6P09630 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
HOXC6P09630 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
HOXC6P09630 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HOXC6P09630 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HOXC6P09630 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.33■■□□□ 1.65
HOXC6P09630 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.33■■□□□ 1.65
HOXC6P09630 KRT18P61-201ENST00000585825 1298 ntBASIC25.33■■□□□ 1.65
HOXC6P09630 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
HOXC6P09630 AP003733.4-201ENST00000623785 1697 ntBASIC25.32■■□□□ 1.64
HOXC6P09630 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
HOXC6P09630 LINC01529-204ENST00000636474 1715 ntBASIC25.32■■□□□ 1.64
HOXC6P09630 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
HOXC6P09630 AC144652.1-201ENST00000609974 1624 ntBASIC25.32■■□□□ 1.64
HOXC6P09630 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
HOXC6P09630 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
HOXC6P09630 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.31■■□□□ 1.64
HOXC6P09630 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.31■■□□□ 1.64
HOXC6P09630 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.31■■□□□ 1.64
HOXC6P09630 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.31■■□□□ 1.64
HOXC6P09630 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.31■■□□□ 1.64
HOXC6P09630 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25.31■■□□□ 1.64
HOXC6P09630 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.31■■□□□ 1.64
HOXC6P09630 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HOXC6P09630 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
HOXC6P09630 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HOXC6P09630 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HOXC6P09630 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HOXC6P09630 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HOXC6P09630 HLA-L-209ENST00000420110 1011 ntBASIC25.3■■□□□ 1.64
HOXC6P09630 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.3■■□□□ 1.64
HOXC6P09630 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.3■■□□□ 1.64
HOXC6P09630 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.3■■□□□ 1.64
HOXC6P09630 RAP2CP1-201ENST00000605103 478 ntBASIC25.3■■□□□ 1.64
HOXC6P09630 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
HOXC6P09630 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HOXC6P09630 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms