Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
NGFP01138 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NGFP01138 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.25■□□□□ 0.67
NGFP01138 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NGFP01138 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NGFP01138 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.25■□□□□ 0.67
NGFP01138 AL136116.3-201ENST00000402907 1138 ntBASIC19.25■□□□□ 0.67
NGFP01138 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.25■□□□□ 0.67
NGFP01138 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.25■□□□□ 0.67
NGFP01138 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NGFP01138 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
NGFP01138 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NGFP01138 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NGFP01138 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NGFP01138 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.24■□□□□ 0.67
NGFP01138 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
NGFP01138 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.24■□□□□ 0.67
NGFP01138 AC006455.2-201ENST00000429931 906 ntBASIC19.24■□□□□ 0.67
NGFP01138 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.24■□□□□ 0.67
NGFP01138 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NGFP01138 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NGFP01138 AC241377.3-202ENST00000626088 1088 ntBASIC19.24■□□□□ 0.67
NGFP01138 AC241585.3-202ENST00000628937 1088 ntBASIC19.24■□□□□ 0.67
NGFP01138 AC245100.8-202ENST00000629247 1058 ntBASIC19.24■□□□□ 0.67
NGFP01138 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NGFP01138 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.24■□□□□ 0.67
NGFP01138 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
NGFP01138 AC008406.3-201ENST00000620001 1374 ntBASIC19.23■□□□□ 0.67
NGFP01138 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NGFP01138 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NGFP01138 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NGFP01138 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.23■□□□□ 0.67
NGFP01138 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NGFP01138 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NGFP01138 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NGFP01138 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.23■□□□□ 0.67
NGFP01138 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NGFP01138 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NGFP01138 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NGFP01138 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NGFP01138 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NGFP01138 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.22■□□□□ 0.67
NGFP01138 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.22■□□□□ 0.67
NGFP01138 AC009086.3-201ENST00000623486 1008 ntBASIC19.22■□□□□ 0.67
NGFP01138 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.22■□□□□ 0.67
NGFP01138 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.22■□□□□ 0.67
NGFP01138 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NGFP01138 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NGFP01138 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NGFP01138 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NGFP01138 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.22■□□□□ 0.67
NGFP01138 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NGFP01138 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.21■□□□□ 0.67
NGFP01138 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NGFP01138 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NGFP01138 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NGFP01138 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NGFP01138 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NGFP01138 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NGFP01138 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NGFP01138 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NGFP01138 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.21■□□□□ 0.67
NGFP01138 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.21■□□□□ 0.67
NGFP01138 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
NGFP01138 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.2■□□□□ 0.66
NGFP01138 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NGFP01138 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NGFP01138 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.2■□□□□ 0.66
NGFP01138 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.2■□□□□ 0.66
NGFP01138 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.2■□□□□ 0.66
NGFP01138 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.2■□□□□ 0.66
NGFP01138 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.2■□□□□ 0.66
NGFP01138 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NGFP01138 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NGFP01138 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.19■□□□□ 0.66
NGFP01138 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.19■□□□□ 0.66
NGFP01138 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NGFP01138 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NGFP01138 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.19■□□□□ 0.66
NGFP01138 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.19■□□□□ 0.66
NGFP01138 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NGFP01138 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
NGFP01138 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.18■□□□□ 0.66
NGFP01138 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NGFP01138 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
NGFP01138 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.18■□□□□ 0.66
NGFP01138 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NGFP01138 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NGFP01138 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NGFP01138 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NGFP01138 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.17■□□□□ 0.66
NGFP01138 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NGFP01138 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NGFP01138 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.17■□□□□ 0.66
NGFP01138 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NGFP01138 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NGFP01138 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.17■□□□□ 0.66
NGFP01138 pRNA.6-201ENST00000610482 90 ntBASIC19.17■□□□□ 0.66
NGFP01138 pRNA.5-201ENST00000612139 90 ntBASIC19.17■□□□□ 0.66
NGFP01138 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms