Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NKX2-2O95096 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NKX2-2O95096 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NKX2-2O95096 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NKX2-2O95096 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.57■□□□□ 0.88
NKX2-2O95096 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NKX2-2O95096 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.57■□□□□ 0.88
NKX2-2O95096 C1orf229-201ENST00000623686 2258 ntBASIC20.57■□□□□ 0.88
NKX2-2O95096 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NKX2-2O95096 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.57■□□□□ 0.88
NKX2-2O95096 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NKX2-2O95096 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NKX2-2O95096 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NKX2-2O95096 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NKX2-2O95096 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.56■□□□□ 0.88
NKX2-2O95096 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NKX2-2O95096 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.56■□□□□ 0.88
NKX2-2O95096 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NKX2-2O95096 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.56■□□□□ 0.88
NKX2-2O95096 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NKX2-2O95096 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.56■□□□□ 0.88
NKX2-2O95096 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NKX2-2O95096 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NKX2-2O95096 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
NKX2-2O95096 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NKX2-2O95096 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NKX2-2O95096 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NKX2-2O95096 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NKX2-2O95096 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NKX2-2O95096 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NKX2-2O95096 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.55■□□□□ 0.88
NKX2-2O95096 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.55■□□□□ 0.88
NKX2-2O95096 AL499627.2-201ENST00000606283 725 ntBASIC20.55■□□□□ 0.88
NKX2-2O95096 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NKX2-2O95096 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.55■□□□□ 0.88
NKX2-2O95096 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NKX2-2O95096 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.54■□□□□ 0.88
NKX2-2O95096 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.54■□□□□ 0.88
NKX2-2O95096 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NKX2-2O95096 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.54■□□□□ 0.88
NKX2-2O95096 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.54■□□□□ 0.88
NKX2-2O95096 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.54■□□□□ 0.88
NKX2-2O95096 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NKX2-2O95096 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.54■□□□□ 0.88
NKX2-2O95096 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NKX2-2O95096 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.54■□□□□ 0.88
NKX2-2O95096 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.54■□□□□ 0.88
NKX2-2O95096 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NKX2-2O95096 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.54■□□□□ 0.88
NKX2-2O95096 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
NKX2-2O95096 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NKX2-2O95096 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NKX2-2O95096 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.53■□□□□ 0.88
NKX2-2O95096 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NKX2-2O95096 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NKX2-2O95096 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NKX2-2O95096 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NKX2-2O95096 SRD5A1P1-201ENST00000442297 786 ntBASIC20.53■□□□□ 0.88
NKX2-2O95096 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NKX2-2O95096 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.53■□□□□ 0.88
NKX2-2O95096 AC099791.2-201ENST00000605725 427 ntBASIC20.53■□□□□ 0.88
NKX2-2O95096 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NKX2-2O95096 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NKX2-2O95096 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.53■□□□□ 0.88
NKX2-2O95096 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NKX2-2O95096 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NKX2-2O95096 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NKX2-2O95096 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NKX2-2O95096 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NKX2-2O95096 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.52■□□□□ 0.88
NKX2-2O95096 MIR4466-201ENST00000606121 54 ntBASIC20.52■□□□□ 0.88
NKX2-2O95096 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.52■□□□□ 0.88
NKX2-2O95096 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NKX2-2O95096 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NKX2-2O95096 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.52■□□□□ 0.88
NKX2-2O95096 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NKX2-2O95096 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.52■□□□□ 0.87
NKX2-2O95096 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NKX2-2O95096 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NKX2-2O95096 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.52■□□□□ 0.87
NKX2-2O95096 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NKX2-2O95096 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NKX2-2O95096 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NKX2-2O95096 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NKX2-2O95096 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX2-2O95096 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX2-2O95096 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX2-2O95096 AC006455.2-201ENST00000429931 906 ntBASIC20.51■□□□□ 0.87
NKX2-2O95096 AC131281.2-201ENST00000520478 145 ntBASIC20.51■□□□□ 0.87
NKX2-2O95096 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.51■□□□□ 0.87
NKX2-2O95096 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.51■□□□□ 0.87
NKX2-2O95096 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX2-2O95096 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.51■□□□□ 0.87
NKX2-2O95096 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.51■□□□□ 0.87
NKX2-2O95096 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NKX2-2O95096 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX2-2O95096 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX2-2O95096 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
NKX2-2O95096 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.51■□□□□ 0.87
NKX2-2O95096 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms