Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.29■■□□□ 1
LCMT2O60294 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.29■■□□□ 1
LCMT2O60294 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.29■■□□□ 1
LCMT2O60294 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.29■■□□□ 1
LCMT2O60294 pRNA.6-201ENST00000610482 90 ntBASIC21.29■■□□□ 1
LCMT2O60294 pRNA.5-201ENST00000612139 90 ntBASIC21.29■■□□□ 1
LCMT2O60294 pRNA.11-201ENST00000618423 90 ntBASIC21.29■■□□□ 1
LCMT2O60294 pRNA.13-201ENST00000619112 90 ntBASIC21.29■■□□□ 1
LCMT2O60294 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCMT2O60294 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
LCMT2O60294 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.29■■□□□ 1
LCMT2O60294 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCMT2O60294 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
LCMT2O60294 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LCMT2O60294 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LCMT2O60294 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.28■■□□□ 1
LCMT2O60294 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LCMT2O60294 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.28■■□□□ 1
LCMT2O60294 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.28■■□□□ 1
LCMT2O60294 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
LCMT2O60294 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCMT2O60294 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.28■■□□□ 1
LCMT2O60294 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.28■■□□□ 1
LCMT2O60294 MIR3181-201ENST00000578512 73 ntBASIC21.28■■□□□ 1
LCMT2O60294 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.28■■□□□ 1
LCMT2O60294 AL499627.2-201ENST00000606283 725 ntBASIC21.28■■□□□ 1
LCMT2O60294 AC092171.4-201ENST00000609130 632 ntBASIC21.28■■□□□ 1
LCMT2O60294 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.28■■□□□ 1
LCMT2O60294 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LCMT2O60294 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCMT2O60294 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCMT2O60294 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCMT2O60294 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.28■■□□□ 1
LCMT2O60294 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.28■■□□□ 1
LCMT2O60294 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCMT2O60294 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.27■■□□□ 1
LCMT2O60294 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LCMT2O60294 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
LCMT2O60294 SERBP1P1-201ENST00000396021 1160 ntBASIC21.27■■□□□ 1
LCMT2O60294 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.27■■□□□ 1
LCMT2O60294 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.27■■□□□ 1
LCMT2O60294 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LCMT2O60294 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCMT2O60294 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LCMT2O60294 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.27■■□□□ 1
LCMT2O60294 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LCMT2O60294 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LCMT2O60294 SYT6-210ENST00000641643 1587 ntBASIC21.27■□□□□ 0.99
LCMT2O60294 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.27■□□□□ 0.99
LCMT2O60294 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LCMT2O60294 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCMT2O60294 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
LCMT2O60294 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LCMT2O60294 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LCMT2O60294 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.26■□□□□ 0.99
LCMT2O60294 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.26■□□□□ 0.99
LCMT2O60294 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCMT2O60294 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.26■□□□□ 0.99
LCMT2O60294 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.25■□□□□ 0.99
LCMT2O60294 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCMT2O60294 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.25■□□□□ 0.99
LCMT2O60294 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCMT2O60294 UNC93B3-201ENST00000308076 687 ntBASIC21.25■□□□□ 0.99
LCMT2O60294 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCMT2O60294 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCMT2O60294 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.25■□□□□ 0.99
LCMT2O60294 DUX4L19-201ENST00000557448 1267 ntBASIC21.25■□□□□ 0.99
LCMT2O60294 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCMT2O60294 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
LCMT2O60294 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCMT2O60294 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
LCMT2O60294 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCMT2O60294 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCMT2O60294 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCMT2O60294 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCMT2O60294 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.24■□□□□ 0.99
LCMT2O60294 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCMT2O60294 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCMT2O60294 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.24■□□□□ 0.99
LCMT2O60294 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.24■□□□□ 0.99
LCMT2O60294 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCMT2O60294 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LCMT2O60294 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCMT2O60294 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCMT2O60294 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCMT2O60294 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.23■□□□□ 0.99
LCMT2O60294 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LCMT2O60294 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LCMT2O60294 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCMT2O60294 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCMT2O60294 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCMT2O60294 AC096631.2-201ENST00000436136 790 ntBASIC21.23■□□□□ 0.99
LCMT2O60294 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.23■□□□□ 0.99
LCMT2O60294 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCMT2O60294 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.23■□□□□ 0.99
LCMT2O60294 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCMT2O60294 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
LCMT2O60294 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
LCMT2O60294 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LCMT2O60294 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms