Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SSNA1O43805 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.93■□□□□ 0.62
SSNA1O43805 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SSNA1O43805 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSNA1O43805 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.93■□□□□ 0.62
SSNA1O43805 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SSNA1O43805 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SSNA1O43805 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSNA1O43805 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SSNA1O43805 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSNA1O43805 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSNA1O43805 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSNA1O43805 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSNA1O43805 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.92■□□□□ 0.62
SSNA1O43805 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSNA1O43805 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SSNA1O43805 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SSNA1O43805 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSNA1O43805 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.92■□□□□ 0.62
SSNA1O43805 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.92■□□□□ 0.62
SSNA1O43805 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SSNA1O43805 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SSNA1O43805 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SSNA1O43805 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SSNA1O43805 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.91■□□□□ 0.62
SSNA1O43805 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSNA1O43805 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.91■□□□□ 0.62
SSNA1O43805 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SSNA1O43805 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSNA1O43805 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SSNA1O43805 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SSNA1O43805 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.9■□□□□ 0.62
SSNA1O43805 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSNA1O43805 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSNA1O43805 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSNA1O43805 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSNA1O43805 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSNA1O43805 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SSNA1O43805 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SSNA1O43805 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.9■□□□□ 0.62
SSNA1O43805 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SSNA1O43805 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.9■□□□□ 0.62
SSNA1O43805 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSNA1O43805 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SSNA1O43805 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SSNA1O43805 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SSNA1O43805 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSNA1O43805 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSNA1O43805 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.89■□□□□ 0.61
SSNA1O43805 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSNA1O43805 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.89■□□□□ 0.61
SSNA1O43805 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSNA1O43805 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSNA1O43805 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SSNA1O43805 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSNA1O43805 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSNA1O43805 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSNA1O43805 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.88■□□□□ 0.61
SSNA1O43805 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.88■□□□□ 0.61
SSNA1O43805 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SSNA1O43805 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
SSNA1O43805 MIR3665-201ENST00000578708 105 ntBASIC18.88■□□□□ 0.61
SSNA1O43805 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
SSNA1O43805 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSNA1O43805 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSNA1O43805 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSNA1O43805 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSNA1O43805 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SSNA1O43805 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSNA1O43805 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.88■□□□□ 0.61
SSNA1O43805 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSNA1O43805 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
SSNA1O43805 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSNA1O43805 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SSNA1O43805 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSNA1O43805 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSNA1O43805 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SSNA1O43805 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SSNA1O43805 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SSNA1O43805 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSNA1O43805 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSNA1O43805 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSNA1O43805 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSNA1O43805 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.86■□□□□ 0.61
SSNA1O43805 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SSNA1O43805 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.86■□□□□ 0.61
SSNA1O43805 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSNA1O43805 AL161729.1-201ENST00000604104 1402 ntBASIC18.86■□□□□ 0.61
SSNA1O43805 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.86■□□□□ 0.61
SSNA1O43805 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.86■□□□□ 0.61
SSNA1O43805 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.86■□□□□ 0.61
SSNA1O43805 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSNA1O43805 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSNA1O43805 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSNA1O43805 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.86■□□□□ 0.61
SSNA1O43805 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SSNA1O43805 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.86■□□□□ 0.61
SSNA1O43805 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SSNA1O43805 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSNA1O43805 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms