Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 pRNA.6-201ENST00000610482 90 ntBASIC18.52■□□□□ 0.56
NDUFB3O43676 pRNA.5-201ENST00000612139 90 ntBASIC18.52■□□□□ 0.56
NDUFB3O43676 pRNA.11-201ENST00000618423 90 ntBASIC18.52■□□□□ 0.56
NDUFB3O43676 pRNA.13-201ENST00000619112 90 ntBASIC18.52■□□□□ 0.56
NDUFB3O43676 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.52■□□□□ 0.56
NDUFB3O43676 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.52■□□□□ 0.56
NDUFB3O43676 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFB3O43676 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDUFB3O43676 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.52■□□□□ 0.55
NDUFB3O43676 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
NDUFB3O43676 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
NDUFB3O43676 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFB3O43676 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFB3O43676 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NDUFB3O43676 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFB3O43676 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
NDUFB3O43676 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFB3O43676 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.51■□□□□ 0.55
NDUFB3O43676 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.51■□□□□ 0.55
NDUFB3O43676 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFB3O43676 UNC93B3-201ENST00000308076 687 ntBASIC18.51■□□□□ 0.55
NDUFB3O43676 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFB3O43676 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFB3O43676 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.51■□□□□ 0.55
NDUFB3O43676 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.51■□□□□ 0.55
NDUFB3O43676 AC096631.2-201ENST00000436136 790 ntBASIC18.51■□□□□ 0.55
NDUFB3O43676 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFB3O43676 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFB3O43676 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.51■□□□□ 0.55
NDUFB3O43676 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NDUFB3O43676 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFB3O43676 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFB3O43676 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.51■□□□□ 0.55
NDUFB3O43676 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NDUFB3O43676 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDUFB3O43676 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDUFB3O43676 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.5■□□□□ 0.55
NDUFB3O43676 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.5■□□□□ 0.55
NDUFB3O43676 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.5■□□□□ 0.55
NDUFB3O43676 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDUFB3O43676 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDUFB3O43676 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NDUFB3O43676 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDUFB3O43676 AL138724.1-201ENST00000606771 1088 ntBASIC18.5■□□□□ 0.55
NDUFB3O43676 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.5■□□□□ 0.55
NDUFB3O43676 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDUFB3O43676 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDUFB3O43676 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
NDUFB3O43676 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.49■□□□□ 0.55
NDUFB3O43676 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDUFB3O43676 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDUFB3O43676 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NDUFB3O43676 SERBP1P1-201ENST00000396021 1160 ntBASIC18.49■□□□□ 0.55
NDUFB3O43676 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.49■□□□□ 0.55
NDUFB3O43676 MIR3181-201ENST00000578512 73 ntBASIC18.49■□□□□ 0.55
NDUFB3O43676 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.49■□□□□ 0.55
NDUFB3O43676 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
NDUFB3O43676 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.49■□□□□ 0.55
NDUFB3O43676 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDUFB3O43676 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDUFB3O43676 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.49■□□□□ 0.55
NDUFB3O43676 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDUFB3O43676 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.48■□□□□ 0.55
NDUFB3O43676 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDUFB3O43676 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NDUFB3O43676 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NDUFB3O43676 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.48■□□□□ 0.55
NDUFB3O43676 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDUFB3O43676 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
NDUFB3O43676 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.48■□□□□ 0.55
NDUFB3O43676 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDUFB3O43676 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.48■□□□□ 0.55
NDUFB3O43676 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NDUFB3O43676 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.48■□□□□ 0.55
NDUFB3O43676 AL499627.2-201ENST00000606283 725 ntBASIC18.48■□□□□ 0.55
NDUFB3O43676 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NDUFB3O43676 AL136162.1-201ENST00000607711 1078 ntBASIC18.48■□□□□ 0.55
NDUFB3O43676 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NDUFB3O43676 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NDUFB3O43676 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.47■□□□□ 0.55
NDUFB3O43676 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFB3O43676 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFB3O43676 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFB3O43676 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFB3O43676 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFB3O43676 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFB3O43676 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.47■□□□□ 0.55
NDUFB3O43676 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFB3O43676 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFB3O43676 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.47■□□□□ 0.55
NDUFB3O43676 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFB3O43676 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFB3O43676 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFB3O43676 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFB3O43676 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NDUFB3O43676 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.47■□□□□ 0.55
NDUFB3O43676 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.47■□□□□ 0.55
NDUFB3O43676 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NDUFB3O43676 DUSP8P5-201ENST00000422884 1815 ntBASIC18.46■□□□□ 0.55
NDUFB3O43676 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms