Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EIF3FO00303 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.76■■□□□ 1.07
EIF3FO00303 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.76■■□□□ 1.07
EIF3FO00303 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EIF3FO00303 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
EIF3FO00303 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.76■■□□□ 1.07
EIF3FO00303 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
EIF3FO00303 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.75■■□□□ 1.07
EIF3FO00303 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.75■■□□□ 1.07
EIF3FO00303 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EIF3FO00303 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.75■■□□□ 1.07
EIF3FO00303 AL499627.2-201ENST00000606283 725 ntBASIC21.75■■□□□ 1.07
EIF3FO00303 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
EIF3FO00303 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
EIF3FO00303 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
EIF3FO00303 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
EIF3FO00303 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
EIF3FO00303 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
EIF3FO00303 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
EIF3FO00303 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.74■■□□□ 1.07
EIF3FO00303 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EIF3FO00303 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
EIF3FO00303 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EIF3FO00303 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.74■■□□□ 1.07
EIF3FO00303 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.74■■□□□ 1.07
EIF3FO00303 AL512631.2-201ENST00000604634 923 ntBASIC21.74■■□□□ 1.07
EIF3FO00303 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EIF3FO00303 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.74■■□□□ 1.07
EIF3FO00303 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EIF3FO00303 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.74■■□□□ 1.07
EIF3FO00303 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EIF3FO00303 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EIF3FO00303 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
EIF3FO00303 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EIF3FO00303 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EIF3FO00303 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
EIF3FO00303 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EIF3FO00303 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.73■■□□□ 1.07
EIF3FO00303 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EIF3FO00303 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EIF3FO00303 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.73■■□□□ 1.07
EIF3FO00303 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
EIF3FO00303 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3FO00303 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3FO00303 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
EIF3FO00303 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.72■■□□□ 1.07
EIF3FO00303 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3FO00303 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.72■■□□□ 1.07
EIF3FO00303 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.72■■□□□ 1.07
EIF3FO00303 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.72■■□□□ 1.07
EIF3FO00303 AC092171.4-201ENST00000609130 632 ntBASIC21.72■■□□□ 1.07
EIF3FO00303 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3FO00303 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.72■■□□□ 1.07
EIF3FO00303 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3FO00303 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3FO00303 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EIF3FO00303 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.72■■□□□ 1.07
EIF3FO00303 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.72■■□□□ 1.07
EIF3FO00303 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3FO00303 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3FO00303 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
EIF3FO00303 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3FO00303 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
EIF3FO00303 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.71■■□□□ 1.07
EIF3FO00303 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3FO00303 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3FO00303 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.71■■□□□ 1.07
EIF3FO00303 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.71■■□□□ 1.07
EIF3FO00303 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3FO00303 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.71■■□□□ 1.07
EIF3FO00303 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.71■■□□□ 1.07
EIF3FO00303 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
EIF3FO00303 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
EIF3FO00303 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3FO00303 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3FO00303 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
EIF3FO00303 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.7■■□□□ 1.06
EIF3FO00303 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EIF3FO00303 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
EIF3FO00303 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
EIF3FO00303 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.7■■□□□ 1.06
EIF3FO00303 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EIF3FO00303 SRD5A1P1-201ENST00000442297 786 ntBASIC21.7■■□□□ 1.06
EIF3FO00303 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.7■■□□□ 1.06
EIF3FO00303 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.7■■□□□ 1.06
EIF3FO00303 AC133561.1-201ENST00000568600 2415 ntBASIC21.7■■□□□ 1.06
EIF3FO00303 CLDN5-201ENST00000403084 2357 ntBASIC21.69■■□□□ 1.06
EIF3FO00303 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3FO00303 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3FO00303 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3FO00303 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
EIF3FO00303 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.69■■□□□ 1.06
EIF3FO00303 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3FO00303 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.69■■□□□ 1.06
EIF3FO00303 C1orf229-201ENST00000623686 2258 ntBASIC21.69■■□□□ 1.06
EIF3FO00303 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3FO00303 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
EIF3FO00303 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3FO00303 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
EIF3FO00303 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms