Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TNFRSF11BO00300 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF11BO00300 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF11BO00300 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF11BO00300 RARRES2P2-201ENST00000394842 485 ntBASIC20.53■□□□□ 0.88
TNFRSF11BO00300 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.53■□□□□ 0.88
TNFRSF11BO00300 AC120024.1-201ENST00000562672 995 ntBASIC20.53■□□□□ 0.88
TNFRSF11BO00300 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF11BO00300 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF11BO00300 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TNFRSF11BO00300 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF11BO00300 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF11BO00300 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFRSF11BO00300 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TNFRSF11BO00300 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TNFRSF11BO00300 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFRSF11BO00300 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF11BO00300 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF11BO00300 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF11BO00300 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.52■□□□□ 0.88
TNFRSF11BO00300 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
TNFRSF11BO00300 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.52■□□□□ 0.88
TNFRSF11BO00300 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF11BO00300 AF131216.4-201ENST00000638924 1588 ntBASIC20.52■□□□□ 0.88
TNFRSF11BO00300 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
TNFRSF11BO00300 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF11BO00300 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TNFRSF11BO00300 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF11BO00300 KRT18P60-201ENST00000312876 1297 ntBASIC20.52■□□□□ 0.88
TNFRSF11BO00300 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
TNFRSF11BO00300 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF11BO00300 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.52■□□□□ 0.88
TNFRSF11BO00300 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TNFRSF11BO00300 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.52■□□□□ 0.87
TNFRSF11BO00300 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
TNFRSF11BO00300 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.51■□□□□ 0.87
TNFRSF11BO00300 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF11BO00300 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF11BO00300 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.51■□□□□ 0.87
TNFRSF11BO00300 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF11BO00300 AC004448.1-201ENST00000458332 883 ntBASIC20.51■□□□□ 0.87
TNFRSF11BO00300 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF11BO00300 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.51■□□□□ 0.87
TNFRSF11BO00300 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF11BO00300 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF11BO00300 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF11BO00300 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF11BO00300 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF11BO00300 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF11BO00300 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TNFRSF11BO00300 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 AC080038.3-201ENST00000623346 1952 ntBASIC20.5■□□□□ 0.87
TNFRSF11BO00300 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF11BO00300 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TNFRSF11BO00300 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF11BO00300 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF11BO00300 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF11BO00300 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF11BO00300 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TNFRSF11BO00300 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF11BO00300 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF11BO00300 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.48■□□□□ 0.87
TNFRSF11BO00300 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
TNFRSF11BO00300 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF11BO00300 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TNFRSF11BO00300 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF11BO00300 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF11BO00300 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.47■□□□□ 0.87
TNFRSF11BO00300 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF11BO00300 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF11BO00300 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF11BO00300 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF11BO00300 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
TNFRSF11BO00300 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.47■□□□□ 0.87
TNFRSF11BO00300 DUX4L18-201ENST00000553347 1267 ntBASIC20.47■□□□□ 0.87
TNFRSF11BO00300 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.47■□□□□ 0.87
TNFRSF11BO00300 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF11BO00300 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF11BO00300 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF11BO00300 AL137060.1-201ENST00000618151 2648 ntBASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms