Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.5
LINC00862A6NCI5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00862A6NCI5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00862A6NCI5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00862A6NCI5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00862A6NCI5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LINC00862A6NCI5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC00862A6NCI5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00862A6NCI5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
LINC00862A6NCI5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00862A6NCI5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00862A6NCI5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LINC00862A6NCI5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00862A6NCI5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00862A6NCI5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00862A6NCI5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00862A6NCI5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00862A6NCI5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC00862A6NCI5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC00862A6NCI5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00862A6NCI5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
LINC00862A6NCI5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00862A6NCI5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LINC00862A6NCI5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00862A6NCI5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC00862A6NCI5 LINC00273-201ENST00000539813 1452 ntBASIC18.19■□□□□ 0.5
LINC00862A6NCI5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC00862A6NCI5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.19■□□□□ 0.5
LINC00862A6NCI5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00862A6NCI5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00862A6NCI5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC00862A6NCI5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00862A6NCI5 LETM1P2-201ENST00000597330 2178 ntBASIC18.17■□□□□ 0.5
LINC00862A6NCI5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.17■□□□□ 0.5
LINC00862A6NCI5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00862A6NCI5 AC026471.1-201ENST00000564629 3026 ntBASIC18.17■□□□□ 0.5
LINC00862A6NCI5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00862A6NCI5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00862A6NCI5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00862A6NCI5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LINC00862A6NCI5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
LINC00862A6NCI5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00862A6NCI5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00862A6NCI5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00862A6NCI5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC00862A6NCI5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
LINC00862A6NCI5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00862A6NCI5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00862A6NCI5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00862A6NCI5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00862A6NCI5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
LINC00862A6NCI5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.16■□□□□ 0.5
LINC00862A6NCI5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.16■□□□□ 0.5
LINC00862A6NCI5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.16■□□□□ 0.5
LINC00862A6NCI5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00862A6NCI5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00862A6NCI5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LINC00862A6NCI5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LINC00862A6NCI5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
LINC00862A6NCI5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LINC00862A6NCI5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00862A6NCI5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.16■□□□□ 0.5
LINC00862A6NCI5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00862A6NCI5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LINC00862A6NCI5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
LINC00862A6NCI5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms