Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SSC5DA1L4H1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SSC5DA1L4H1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.35■■□□□ 1.81
SSC5DA1L4H1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.35■■□□□ 1.81
SSC5DA1L4H1 GXYLT1P5-201ENST00000614548 1189 ntBASIC26.35■■□□□ 1.81
SSC5DA1L4H1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
SSC5DA1L4H1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
SSC5DA1L4H1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
SSC5DA1L4H1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SSC5DA1L4H1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.34■■□□□ 1.81
SSC5DA1L4H1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.34■■□□□ 1.81
SSC5DA1L4H1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SSC5DA1L4H1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.34■■□□□ 1.81
SSC5DA1L4H1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.34■■□□□ 1.81
SSC5DA1L4H1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SSC5DA1L4H1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SSC5DA1L4H1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SSC5DA1L4H1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SSC5DA1L4H1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.34■■□□□ 1.81
SSC5DA1L4H1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.33■■□□□ 1.81
SSC5DA1L4H1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC26.33■■□□□ 1.81
SSC5DA1L4H1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
SSC5DA1L4H1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.33■■□□□ 1.81
SSC5DA1L4H1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SSC5DA1L4H1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SSC5DA1L4H1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.33■■□□□ 1.8
SSC5DA1L4H1 DBI-210ENST00000542275 757 ntTSL 5 BASIC26.33■■□□□ 1.8
SSC5DA1L4H1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26.33■■□□□ 1.8
SSC5DA1L4H1 AC135731.1-201ENST00000569415 2548 ntBASIC26.32■■□□□ 1.8
SSC5DA1L4H1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SSC5DA1L4H1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.32■■□□□ 1.8
SSC5DA1L4H1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SSC5DA1L4H1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.32■■□□□ 1.8
SSC5DA1L4H1 FP325331.1-202ENST00000623531 1380 ntBASIC26.32■■□□□ 1.8
SSC5DA1L4H1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.32■■□□□ 1.8
SSC5DA1L4H1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.32■■□□□ 1.8
SSC5DA1L4H1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC26.32■■□□□ 1.8
SSC5DA1L4H1 AC137761.2-201ENST00000561729 223 ntBASIC26.32■■□□□ 1.8
SSC5DA1L4H1 AC145350.3-201ENST00000569033 163 ntBASIC26.32■■□□□ 1.8
SSC5DA1L4H1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.32■■□□□ 1.8
SSC5DA1L4H1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
SSC5DA1L4H1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SSC5DA1L4H1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SSC5DA1L4H1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.31■■□□□ 1.8
SSC5DA1L4H1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SSC5DA1L4H1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC26.31■■□□□ 1.8
SSC5DA1L4H1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.31■■□□□ 1.8
SSC5DA1L4H1 AC104771.1-201ENST00000603335 964 ntBASIC26.31■■□□□ 1.8
SSC5DA1L4H1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
SSC5DA1L4H1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SSC5DA1L4H1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
SSC5DA1L4H1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
SSC5DA1L4H1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.3■■□□□ 1.8
SSC5DA1L4H1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SSC5DA1L4H1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
SSC5DA1L4H1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SSC5DA1L4H1 AC004854.2-201ENST00000608450 1441 ntBASIC26.3■■□□□ 1.8
SSC5DA1L4H1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SSC5DA1L4H1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC26.29■■□□□ 1.8
SSC5DA1L4H1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SSC5DA1L4H1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.29■■□□□ 1.8
SSC5DA1L4H1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SSC5DA1L4H1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SSC5DA1L4H1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SSC5DA1L4H1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SSC5DA1L4H1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SSC5DA1L4H1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC26.29■■□□□ 1.8
SSC5DA1L4H1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SSC5DA1L4H1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SSC5DA1L4H1 AC144652.1-201ENST00000609974 1624 ntBASIC26.28■■□□□ 1.8
SSC5DA1L4H1 AP004607.4-201ENST00000530158 1459 ntBASIC26.28■■□□□ 1.8
SSC5DA1L4H1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SSC5DA1L4H1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.28■■□□□ 1.8
SSC5DA1L4H1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.28■■□□□ 1.8
SSC5DA1L4H1 AC016769.1-201ENST00000409132 1010 ntBASIC26.28■■□□□ 1.8
SSC5DA1L4H1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SSC5DA1L4H1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.28■■□□□ 1.8
SSC5DA1L4H1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.28■■□□□ 1.8
SSC5DA1L4H1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SSC5DA1L4H1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SSC5DA1L4H1 ABHD17AP1-201ENST00000358206 933 ntBASIC26.27■■□□□ 1.8
SSC5DA1L4H1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.27■■□□□ 1.8
SSC5DA1L4H1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SSC5DA1L4H1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SSC5DA1L4H1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SSC5DA1L4H1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SSC5DA1L4H1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SSC5DA1L4H1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SSC5DA1L4H1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SSC5DA1L4H1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SSC5DA1L4H1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC26.26■■□□□ 1.79
SSC5DA1L4H1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SSC5DA1L4H1 GAS2L1P2-201ENST00000436355 1356 ntBASIC26.26■■□□□ 1.79
SSC5DA1L4H1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
SSC5DA1L4H1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SSC5DA1L4H1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SSC5DA1L4H1 CROCCP5-201ENST00000436658 830 ntBASIC26.25■■□□□ 1.79
SSC5DA1L4H1 PPP1R14BP3-201ENST00000509033 445 ntBASIC26.25■■□□□ 1.79
SSC5DA1L4H1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.25■■□□□ 1.79
SSC5DA1L4H1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms