Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 AC080038.3-201ENST00000623346 1952 ntBASIC22.41■■□□□ 1.18
TCRBV9S1A1TA0A576 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.41■■□□□ 1.18
TCRBV9S1A1TA0A576 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
TCRBV9S1A1TA0A576 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.41■■□□□ 1.18
TCRBV9S1A1TA0A576 AC087742.1-201ENST00000575880 1738 ntBASIC22.41■■□□□ 1.18
TCRBV9S1A1TA0A576 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TCRBV9S1A1TA0A576 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.41■■□□□ 1.18
TCRBV9S1A1TA0A576 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TCRBV9S1A1TA0A576 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.41■■□□□ 1.18
TCRBV9S1A1TA0A576 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TCRBV9S1A1TA0A576 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
TCRBV9S1A1TA0A576 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.39■■□□□ 1.18
TCRBV9S1A1TA0A576 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
TCRBV9S1A1TA0A576 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
TCRBV9S1A1TA0A576 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.39■■□□□ 1.18
TCRBV9S1A1TA0A576 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
TCRBV9S1A1TA0A576 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
TCRBV9S1A1TA0A576 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TCRBV9S1A1TA0A576 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.39■■□□□ 1.17
TCRBV9S1A1TA0A576 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.39■■□□□ 1.17
TCRBV9S1A1TA0A576 AC103724.3-201ENST00000564481 992 ntBASIC22.39■■□□□ 1.17
TCRBV9S1A1TA0A576 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TCRBV9S1A1TA0A576 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
TCRBV9S1A1TA0A576 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TCRBV9S1A1TA0A576 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
TCRBV9S1A1TA0A576 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TCRBV9S1A1TA0A576 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
TCRBV9S1A1TA0A576 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TCRBV9S1A1TA0A576 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 AC092053.2-201ENST00000640557 1818 ntBASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 AC012354.3-201ENST00000623734 483 ntBASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TCRBV9S1A1TA0A576 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TCRBV9S1A1TA0A576 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TCRBV9S1A1TA0A576 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TCRBV9S1A1TA0A576 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TCRBV9S1A1TA0A576 AC007375.3-201ENST00000600936 2314 ntBASIC22.37■■□□□ 1.17
TCRBV9S1A1TA0A576 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TCRBV9S1A1TA0A576 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.37■■□□□ 1.17
TCRBV9S1A1TA0A576 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TCRBV9S1A1TA0A576 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TCRBV9S1A1TA0A576 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
TCRBV9S1A1TA0A576 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TCRBV9S1A1TA0A576 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.36■■□□□ 1.17
TCRBV9S1A1TA0A576 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TCRBV9S1A1TA0A576 AL033527.3-201ENST00000566366 1196 ntBASIC22.36■■□□□ 1.17
TCRBV9S1A1TA0A576 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.36■■□□□ 1.17
TCRBV9S1A1TA0A576 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TCRBV9S1A1TA0A576 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.36■■□□□ 1.17
TCRBV9S1A1TA0A576 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TCRBV9S1A1TA0A576 C11orf96-202ENST00000528572 1834 ntBASIC22.36■■□□□ 1.17
TCRBV9S1A1TA0A576 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.35■■□□□ 1.17
TCRBV9S1A1TA0A576 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TCRBV9S1A1TA0A576 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms