Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
DUXBA0A1W2PPF3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DUXBA0A1W2PPF3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DUXBA0A1W2PPF3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.15■□□□□ 0.5
DUXBA0A1W2PPF3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
DUXBA0A1W2PPF3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
DUXBA0A1W2PPF3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
DUXBA0A1W2PPF3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
DUXBA0A1W2PPF3 AC022616.5-201ENST00000518796 181 ntBASIC18.14■□□□□ 0.49
DUXBA0A1W2PPF3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DUXBA0A1W2PPF3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DUXBA0A1W2PPF3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
DUXBA0A1W2PPF3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
DUXBA0A1W2PPF3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DUXBA0A1W2PPF3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DUXBA0A1W2PPF3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DUXBA0A1W2PPF3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 AL592293.1-201ENST00000502889 1188 ntBASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 AC080038.3-201ENST00000623346 1952 ntBASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DUXBA0A1W2PPF3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DUXBA0A1W2PPF3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.12■□□□□ 0.49
DUXBA0A1W2PPF3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DUXBA0A1W2PPF3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DUXBA0A1W2PPF3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DUXBA0A1W2PPF3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.12■□□□□ 0.49
DUXBA0A1W2PPF3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
DUXBA0A1W2PPF3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DUXBA0A1W2PPF3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DUXBA0A1W2PPF3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DUXBA0A1W2PPF3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DUXBA0A1W2PPF3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.11■□□□□ 0.49
DUXBA0A1W2PPF3 FBXW4P1-201ENST00000426721 2239 ntBASIC18.11■□□□□ 0.49
DUXBA0A1W2PPF3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DUXBA0A1W2PPF3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
DUXBA0A1W2PPF3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DUXBA0A1W2PPF3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DUXBA0A1W2PPF3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
DUXBA0A1W2PPF3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DUXBA0A1W2PPF3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.11■□□□□ 0.49
DUXBA0A1W2PPF3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.11■□□□□ 0.49
DUXBA0A1W2PPF3 AC087742.1-201ENST00000575880 1738 ntBASIC18.11■□□□□ 0.49
DUXBA0A1W2PPF3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.11■□□□□ 0.49
DUXBA0A1W2PPF3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.11■□□□□ 0.49
DUXBA0A1W2PPF3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
DUXBA0A1W2PPF3 AL137060.1-201ENST00000618151 2648 ntBASIC18.1■□□□□ 0.49
DUXBA0A1W2PPF3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DUXBA0A1W2PPF3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.1■□□□□ 0.49
DUXBA0A1W2PPF3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
DUXBA0A1W2PPF3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DUXBA0A1W2PPF3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DUXBA0A1W2PPF3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DUXBA0A1W2PPF3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DUXBA0A1W2PPF3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DUXBA0A1W2PPF3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.1■□□□□ 0.49
DUXBA0A1W2PPF3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DUXBA0A1W2PPF3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
DUXBA0A1W2PPF3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DUXBA0A1W2PPF3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DUXBA0A1W2PPF3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DUXBA0A1W2PPF3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
DUXBA0A1W2PPF3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
DUXBA0A1W2PPF3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DUXBA0A1W2PPF3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DUXBA0A1W2PPF3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
DUXBA0A1W2PPF3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DUXBA0A1W2PPF3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DUXBA0A1W2PPF3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DUXBA0A1W2PPF3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DUXBA0A1W2PPF3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.09■□□□□ 0.49
DUXBA0A1W2PPF3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.08■□□□□ 0.49
DUXBA0A1W2PPF3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.08■□□□□ 0.49
DUXBA0A1W2PPF3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
DUXBA0A1W2PPF3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
DUXBA0A1W2PPF3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
DUXBA0A1W2PPF3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
DUXBA0A1W2PPF3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.08■□□□□ 0.48
DUXBA0A1W2PPF3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.08■□□□□ 0.48
DUXBA0A1W2PPF3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.08■□□□□ 0.48
DUXBA0A1W2PPF3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DUXBA0A1W2PPF3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.08■□□□□ 0.48
DUXBA0A1W2PPF3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DUXBA0A1W2PPF3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
DUXBA0A1W2PPF3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.07■□□□□ 0.48
DUXBA0A1W2PPF3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms