Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV3D-20A0A0C4DH25 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV3D-20A0A0C4DH25 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
IGKV3D-20A0A0C4DH25 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IGKV3D-20A0A0C4DH25 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 RARRES2P2-201ENST00000394842 485 ntBASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 AC007375.3-201ENST00000600936 2314 ntBASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IGKV3D-20A0A0C4DH25 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 KRT18P60-201ENST00000312876 1297 ntBASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 AL353803.4-201ENST00000565882 1934 ntBASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGKV3D-20A0A0C4DH25 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 AF131216.4-201ENST00000638924 1588 ntBASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV3D-20A0A0C4DH25 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV3D-20A0A0C4DH25 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV3D-20A0A0C4DH25 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
IGKV3D-20A0A0C4DH25 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV3D-20A0A0C4DH25 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV3D-20A0A0C4DH25 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.46■□□□□ 0.23
IGKV3D-20A0A0C4DH25 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.46■□□□□ 0.23
IGKV3D-20A0A0C4DH25 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV3D-20A0A0C4DH25 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.46■□□□□ 0.23
IGKV3D-20A0A0C4DH25 AC120024.1-201ENST00000562672 995 ntBASIC16.46■□□□□ 0.23
IGKV3D-20A0A0C4DH25 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.46■□□□□ 0.23
IGKV3D-20A0A0C4DH25 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.46■□□□□ 0.23
IGKV3D-20A0A0C4DH25 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.46■□□□□ 0.23
IGKV3D-20A0A0C4DH25 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
IGKV3D-20A0A0C4DH25 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV3D-20A0A0C4DH25 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
IGKV3D-20A0A0C4DH25 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
IGKV3D-20A0A0C4DH25 AC139530.1-201ENST00000575312 1977 ntBASIC16.46■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
IGKV3D-20A0A0C4DH25 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.46■□□□□ 0.22
IGKV3D-20A0A0C4DH25 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3D-20A0A0C4DH25 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3D-20A0A0C4DH25 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.45■□□□□ 0.22
IGKV3D-20A0A0C4DH25 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.45■□□□□ 0.22
IGKV3D-20A0A0C4DH25 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3D-20A0A0C4DH25 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
IGKV3D-20A0A0C4DH25 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.45■□□□□ 0.22
IGKV3D-20A0A0C4DH25 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV3D-20A0A0C4DH25 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms