Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 AC040160.2-201ENST00000623816 1675 ntBASIC11.09□□□□□ -0.63
RAB40CQ96S21 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 AC005034.1-201ENST00000426657 489 ntBASIC11.09□□□□□ -0.63
RAB40CQ96S21 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 RN7SL455P-201ENST00000580629 282 ntBASIC11.09□□□□□ -0.63
RAB40CQ96S21 TP53-221ENST00000615910 1149 ntTSL 5 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 ANKRD20A7P-201ENST00000402318 2414 ntBASIC11.09□□□□□ -0.63
RAB40CQ96S21 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 AC006144.1-201ENST00000424220 1600 ntBASIC11.09□□□□□ -0.63
RAB40CQ96S21 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
RAB40CQ96S21 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC11.08□□□□□ -0.63
RAB40CQ96S21 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 AC005154.3-201ENST00000419639 1393 ntBASIC11.08□□□□□ -0.64
RAB40CQ96S21 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.08□□□□□ -0.64
RAB40CQ96S21 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 AC106886.1-201ENST00000568660 600 ntBASIC11.08□□□□□ -0.64
RAB40CQ96S21 MIR4783-201ENST00000580343 82 ntBASIC11.08□□□□□ -0.64
RAB40CQ96S21 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC11.08□□□□□ -0.64
RAB40CQ96S21 AL162426.1-201ENST00000624141 743 ntBASIC11.08□□□□□ -0.64
RAB40CQ96S21 AL035252.4-201ENST00000624174 288 ntBASIC11.08□□□□□ -0.64
RAB40CQ96S21 DDX5-235ENST00000630471 473 ntTSL 4 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 AC092299.1-201ENST00000632679 757 ntBASIC11.08□□□□□ -0.64
RAB40CQ96S21 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RAB40CQ96S21 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC11.08□□□□□ -0.64
RAB40CQ96S21 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms