Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC12.88□□□□□ -0.35
KNTC1P50748 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
KNTC1P50748 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
KNTC1P50748 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
KNTC1P50748 MIR1226-201ENST00000408658 75 ntBASIC12.88□□□□□ -0.35
KNTC1P50748 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC12.88□□□□□ -0.35
KNTC1P50748 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC12.88□□□□□ -0.35
KNTC1P50748 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC12.88□□□□□ -0.35
KNTC1P50748 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.88□□□□□ -0.35
KNTC1P50748 AC104212.2-201ENST00000478813 628 ntBASIC12.88□□□□□ -0.35
KNTC1P50748 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC12.88□□□□□ -0.35
KNTC1P50748 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.88□□□□□ -0.35
KNTC1P50748 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.88□□□□□ -0.35
KNTC1P50748 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
KNTC1P50748 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
KNTC1P50748 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.88□□□□□ -0.35
KNTC1P50748 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC12.88□□□□□ -0.35
KNTC1P50748 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
KNTC1P50748 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC12.88□□□□□ -0.35
KNTC1P50748 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
KNTC1P50748 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
KNTC1P50748 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 CASP2-203ENST00000392925 616 ntTSL 3 BASIC12.88□□□□□ -0.35
KNTC1P50748 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 PLAC9P1-203ENST00000440031 223 ntBASIC12.88□□□□□ -0.35
KNTC1P50748 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC12.88□□□□□ -0.35
KNTC1P50748 RN7SL479P-201ENST00000472003 300 ntBASIC12.88□□□□□ -0.35
KNTC1P50748 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC12.88□□□□□ -0.35
KNTC1P50748 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.88□□□□□ -0.35
KNTC1P50748 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KNTC1P50748 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
KNTC1P50748 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
KNTC1P50748 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.87□□□□□ -0.35
KNTC1P50748 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.87□□□□□ -0.35
KNTC1P50748 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC12.87□□□□□ -0.35
KNTC1P50748 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
KNTC1P50748 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.87□□□□□ -0.35
KNTC1P50748 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 RBMX2P5-201ENST00000424312 969 ntBASIC12.87□□□□□ -0.35
KNTC1P50748 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC12.87□□□□□ -0.35
KNTC1P50748 HNRNPA1P73-201ENST00000446472 928 ntBASIC12.87□□□□□ -0.35
KNTC1P50748 YBX1P3-201ENST00000468366 909 ntBASIC12.87□□□□□ -0.35
KNTC1P50748 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC12.87□□□□□ -0.35
KNTC1P50748 AC133555.4-201ENST00000569081 152 ntBASIC12.87□□□□□ -0.35
KNTC1P50748 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC12.87□□□□□ -0.35
KNTC1P50748 MIR4640-201ENST00000581824 90 ntBASIC12.87□□□□□ -0.35
KNTC1P50748 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
KNTC1P50748 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC12.87□□□□□ -0.35
KNTC1P50748 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC12.87□□□□□ -0.35
KNTC1P50748 AC134878.2-201ENST00000620700 1265 ntBASIC12.87□□□□□ -0.35
KNTC1P50748 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
KNTC1P50748 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 ANKRD20A3-201ENST00000611388 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 AC106872.9-201ENST00000512437 1393 ntBASIC12.87□□□□□ -0.35
KNTC1P50748 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 AC104640.1-201ENST00000562617 2109 ntBASIC12.87□□□□□ -0.35
KNTC1P50748 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 SFPQP1-201ENST00000446621 1786 ntBASIC12.87□□□□□ -0.35
KNTC1P50748 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
KNTC1P50748 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
KNTC1P50748 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KNTC1P50748 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms