Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ATRXP46100 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC12.25□□□□□ -0.45
ATRXP46100 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ATRXP46100 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ATRXP46100 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ATRXP46100 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ATRXP46100 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ATRXP46100 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ATRXP46100 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.25□□□□□ -0.45
ATRXP46100 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ATRXP46100 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
ATRXP46100 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC12.25□□□□□ -0.45
ATRXP46100 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ATRXP46100 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ATRXP46100 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ATRXP46100 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.25□□□□□ -0.45
ATRXP46100 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ATRXP46100 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ATRXP46100 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ATRXP46100 CSH1-202ENST00000329882 1073 ntTSL 2 BASIC12.25□□□□□ -0.45
ATRXP46100 KRT41P-201ENST00000393988 1293 ntBASIC12.25□□□□□ -0.45
ATRXP46100 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC12.25□□□□□ -0.45
ATRXP46100 AL354993.2-201ENST00000558738 542 ntTSL 4 BASIC12.25□□□□□ -0.45
ATRXP46100 ALOX12P1-201ENST00000579299 1229 ntBASIC12.25□□□□□ -0.45
ATRXP46100 LINC02074-201ENST00000581028 569 ntTSL 4 BASIC12.25□□□□□ -0.45
ATRXP46100 LINC02074-202ENST00000584003 573 ntTSL 4 BASIC12.25□□□□□ -0.45
ATRXP46100 RN7SL238P-201ENST00000613832 290 ntBASIC12.25□□□□□ -0.45
ATRXP46100 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC12.25□□□□□ -0.45
ATRXP46100 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC12.25□□□□□ -0.45
ATRXP46100 RN7SL106P-201ENST00000618104 290 ntBASIC12.25□□□□□ -0.45
ATRXP46100 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC12.25□□□□□ -0.45
ATRXP46100 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
ATRXP46100 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.24□□□□□ -0.45
ATRXP46100 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 ATF4P4-201ENST00000393544 1930 ntBASIC12.24□□□□□ -0.45
ATRXP46100 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
ATRXP46100 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.24□□□□□ -0.45
ATRXP46100 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.24□□□□□ -0.45
ATRXP46100 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ATRXP46100 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.24□□□□□ -0.45
ATRXP46100 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC12.24□□□□□ -0.45
ATRXP46100 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.24□□□□□ -0.45
ATRXP46100 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 IFT43-202ENST00000314067 833 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
ATRXP46100 KRTAP13-1-201ENST00000355459 749 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
ATRXP46100 RNA5SP84-201ENST00000364740 107 ntBASIC12.24□□□□□ -0.45
ATRXP46100 KRTAP19-1-201ENST00000390689 646 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
ATRXP46100 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 PHKA1P1-201ENST00000420457 621 ntBASIC12.24□□□□□ -0.45
ATRXP46100 AC105443.1-201ENST00000433754 712 ntBASIC12.24□□□□□ -0.45
ATRXP46100 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.24□□□□□ -0.45
ATRXP46100 KRT18P15-201ENST00000458108 1291 ntBASIC12.24□□□□□ -0.45
ATRXP46100 FAM86DP-202ENST00000477247 995 ntBASIC12.24□□□□□ -0.45
ATRXP46100 RN7SL789P-201ENST00000478944 293 ntBASIC12.24□□□□□ -0.45
ATRXP46100 AC091057.1-201ENST00000501830 970 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 AC253536.5-201ENST00000506097 347 ntBASIC12.24□□□□□ -0.45
ATRXP46100 AC087752.3-201ENST00000523905 709 ntTSL 2 BASIC12.24□□□□□ -0.45
ATRXP46100 ZNF7-209ENST00000529819 513 ntTSL 4 BASIC12.24□□□□□ -0.45
ATRXP46100 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC12.24□□□□□ -0.45
ATRXP46100 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
ATRXP46100 SRGAP3-AS2-203ENST00000600323 1294 ntTSL 5 BASIC12.24□□□□□ -0.45
ATRXP46100 AC090950.1-202ENST00000605733 644 ntBASIC12.24□□□□□ -0.45
ATRXP46100 AC022392.1-201ENST00000609403 744 ntBASIC12.24□□□□□ -0.45
ATRXP46100 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC12.24□□□□□ -0.45
ATRXP46100 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
ATRXP46100 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ATRXP46100 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.24□□□□□ -0.45
ATRXP46100 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
ATRXP46100 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.24□□□□□ -0.45
ATRXP46100 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
ATRXP46100 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.24□□□□□ -0.45
ATRXP46100 AC006486.2-201ENST00000624246 2199 ntBASIC12.24□□□□□ -0.45
ATRXP46100 CSMD2-202ENST00000338325 1544 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ATRXP46100 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ATRXP46100 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC12.23□□□□□ -0.45
ATRXP46100 GAPDHP1-201ENST00000452570 1005 ntBASIC12.23□□□□□ -0.45
ATRXP46100 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC12.23□□□□□ -0.45
ATRXP46100 TSACC-206ENST00000466306 477 ntTSL 3 BASIC12.23□□□□□ -0.45
ATRXP46100 AC034229.1-201ENST00000506299 943 ntTSL 2 BASIC12.23□□□□□ -0.45
ATRXP46100 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC12.23□□□□□ -0.45
ATRXP46100 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms