Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
CCL3P10147 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CCL3P10147 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCL3P10147 CFL1P6-201ENST00000400899 494 ntBASIC12.33□□□□□ -0.44
CCL3P10147 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL3P10147 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL3P10147 AC026470.1-201ENST00000478038 846 ntBASIC12.33□□□□□ -0.44
CCL3P10147 RN7SL288P-201ENST00000490496 291 ntBASIC12.33□□□□□ -0.44
CCL3P10147 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL3P10147 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL3P10147 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL3P10147 AC092862.1-201ENST00000541534 533 ntBASIC12.33□□□□□ -0.44
CCL3P10147 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 AC244250.3-201ENST00000620749 366 ntBASIC12.33□□□□□ -0.44
CCL3P10147 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL3P10147 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL3P10147 AC139713.2-207ENST00000641556 1292 ntBASIC12.33□□□□□ -0.44
CCL3P10147 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL3P10147 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL3P10147 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL3P10147 AC012358.2-201ENST00000430010 1434 ntBASIC12.33□□□□□ -0.44
CCL3P10147 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
CCL3P10147 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCL3P10147 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL3P10147 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CCL3P10147 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 MIR497HG-202ENST00000572453 3838 ntBASIC12.33□□□□□ -0.44
CCL3P10147 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
CCL3P10147 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CCL3P10147 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCL3P10147 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL3P10147 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3P10147 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3P10147 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CCL3P10147 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL3P10147 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
CCL3P10147 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CCL3P10147 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 TBC1D3P1-201ENST00000590047 1693 ntBASIC12.32□□□□□ -0.44
CCL3P10147 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3P10147 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3P10147 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3P10147 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3P10147 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CCL3P10147 MPV17-209ENST00000405983 859 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL3P10147 OR7E155P-201ENST00000412208 1014 ntBASIC12.32□□□□□ -0.44
CCL3P10147 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3P10147 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL3P10147 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL3P10147 AC112250.1-201ENST00000504640 745 ntBASIC12.32□□□□□ -0.44
CCL3P10147 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC12.32□□□□□ -0.44
CCL3P10147 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3P10147 AP000920.1-201ENST00000531824 344 ntBASIC12.32□□□□□ -0.44
CCL3P10147 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CCL3P10147 HKR1-225ENST00000592168 566 ntTSL 4 BASIC12.32□□□□□ -0.44
CCL3P10147 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC12.32□□□□□ -0.44
CCL3P10147 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL3P10147 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3P10147 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL3P10147 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3P10147 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3P10147 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL3P10147 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
CCL3P10147 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3P10147 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms