Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.15□□□□□ -0.46
APOC1P02654 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
APOC1P02654 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
APOC1P02654 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
APOC1P02654 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
APOC1P02654 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC12.15□□□□□ -0.46
APOC1P02654 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
APOC1P02654 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC1P02654 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.47
APOC1P02654 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
APOC1P02654 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.15□□□□□ -0.47
APOC1P02654 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
APOC1P02654 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
APOC1P02654 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
APOC1P02654 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
APOC1P02654 KRT8P43-201ENST00000406052 1458 ntBASIC12.14□□□□□ -0.47
APOC1P02654 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.14□□□□□ -0.47
APOC1P02654 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 AC004623.1-201ENST00000624592 2127 ntBASIC12.14□□□□□ -0.47
APOC1P02654 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
APOC1P02654 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC1P02654 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.14□□□□□ -0.47
APOC1P02654 NRADDP-202ENST00000641269 1585 ntBASIC12.14□□□□□ -0.47
APOC1P02654 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC1P02654 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC1P02654 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.14□□□□□ -0.47
APOC1P02654 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
APOC1P02654 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 CYP46A4P-201ENST00000414953 267 ntBASIC12.14□□□□□ -0.47
APOC1P02654 PPP1R2P4-201ENST00000424051 595 ntBASIC12.14□□□□□ -0.47
APOC1P02654 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.14□□□□□ -0.47
APOC1P02654 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC1P02654 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.14□□□□□ -0.47
APOC1P02654 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC1P02654 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.14□□□□□ -0.47
APOC1P02654 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC1P02654 AL133467.4-201ENST00000602953 725 ntBASIC12.14□□□□□ -0.47
APOC1P02654 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.14□□□□□ -0.47
APOC1P02654 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 AC008040.5-201ENST00000599781 1781 ntBASIC12.14□□□□□ -0.47
APOC1P02654 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
APOC1P02654 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
APOC1P02654 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC1P02654 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
APOC1P02654 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC12.14□□□□□ -0.47
APOC1P02654 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC1P02654 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.14□□□□□ -0.47
APOC1P02654 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
APOC1P02654 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
APOC1P02654 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC12.13□□□□□ -0.47
APOC1P02654 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 AP002761.4-201ENST00000565433 3361 ntBASIC12.13□□□□□ -0.47
APOC1P02654 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
APOC1P02654 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
APOC1P02654 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
APOC1P02654 LSINCT5-201ENST00000626215 2647 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms