Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AC078819.1-201ENST00000547454 765 ntBASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AC012085.1-201ENST00000548270 765 ntBASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 DNM1P51-201ENST00000558149 522 ntBASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 C2orf69P2-201ENST00000562032 1123 ntBASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AC005962.1-201ENST00000584100 773 ntBASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AC009884.2-201ENST00000603110 324 ntBASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AC004233.3-201ENST00000607794 1269 ntBASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AC009549.1-201ENST00000603468 1686 ntBASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 CICP2-201ENST00000420675 2328 ntBASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 AC138028.6-201ENST00000616106 1482 ntBASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
RCL1Q9Y2P8 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 POM121L7P-201ENST00000329949 2404 ntBASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 AHCYP4-201ENST00000419201 1315 ntBASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 OARD1-212ENST00000482515 832 ntTSL 2 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 CHCHD2P2-201ENST00000503744 321 ntBASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 RPL35-206ENST00000629845 340 ntTSL 5 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RCL1Q9Y2P8 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms