Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CSF1RP07333 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSF1RP07333 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSF1RP07333 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSF1RP07333 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSF1RP07333 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSF1RP07333 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSF1RP07333 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSF1RP07333 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSF1RP07333 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CSF1RP07333 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC16.42■□□□□ 0.22
CSF1RP07333 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CSF1RP07333 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSF1RP07333 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CSF1RP07333 DNM1P46-202ENST00000415963 882 ntBASIC16.42■□□□□ 0.22
CSF1RP07333 RBMX2P5-201ENST00000424312 969 ntBASIC16.42■□□□□ 0.22
CSF1RP07333 EEF1DP5-201ENST00000431410 772 ntBASIC16.42■□□□□ 0.22
CSF1RP07333 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC16.42■□□□□ 0.22
CSF1RP07333 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC16.42■□□□□ 0.22
CSF1RP07333 YY1P2-201ENST00000438766 948 ntBASIC16.42■□□□□ 0.22
CSF1RP07333 AC092865.2-201ENST00000439409 971 ntBASIC16.42■□□□□ 0.22
CSF1RP07333 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC16.42■□□□□ 0.22
CSF1RP07333 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC16.42■□□□□ 0.22
CSF1RP07333 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSF1RP07333 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.42■□□□□ 0.22
CSF1RP07333 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC16.42■□□□□ 0.22
CSF1RP07333 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC16.42■□□□□ 0.22
CSF1RP07333 RN7SL480P-201ENST00000581481 294 ntBASIC16.42■□□□□ 0.22
CSF1RP07333 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC16.42■□□□□ 0.22
CSF1RP07333 NEK4P3-201ENST00000604859 544 ntBASIC16.42■□□□□ 0.22
CSF1RP07333 AC010601.2-201ENST00000623060 774 ntBASIC16.42■□□□□ 0.22
CSF1RP07333 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSF1RP07333 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSF1RP07333 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSF1RP07333 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSF1RP07333 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSF1RP07333 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CSF1RP07333 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC16.41■□□□□ 0.22
CSF1RP07333 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.41■□□□□ 0.22
CSF1RP07333 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC16.41■□□□□ 0.22
CSF1RP07333 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CSF1RP07333 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CSF1RP07333 AC002350.2-201ENST00000623894 1828 ntBASIC16.41■□□□□ 0.22
CSF1RP07333 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CSF1RP07333 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 AC005822.1-201ENST00000414124 1034 ntBASIC16.41■□□□□ 0.22
CSF1RP07333 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CSF1RP07333 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC16.41■□□□□ 0.22
CSF1RP07333 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
CSF1RP07333 RN7SL578P-201ENST00000477781 283 ntBASIC16.41■□□□□ 0.22
CSF1RP07333 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC16.41■□□□□ 0.22
CSF1RP07333 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC16.41■□□□□ 0.22
CSF1RP07333 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC16.41■□□□□ 0.22
CSF1RP07333 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC16.41■□□□□ 0.22
CSF1RP07333 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC16.41■□□□□ 0.22
CSF1RP07333 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC16.41■□□□□ 0.22
CSF1RP07333 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC16.41■□□□□ 0.22
CSF1RP07333 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CSF1RP07333 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CSF1RP07333 FER1L4-210ENST00000615531 5998 ntBASIC16.41■□□□□ 0.22
CSF1RP07333 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CSF1RP07333 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CSF1RP07333 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CSF1RP07333 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 AC009093.9-201ENST00000566038 1611 ntBASIC16.41■□□□□ 0.22
CSF1RP07333 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CSF1RP07333 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSF1RP07333 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSF1RP07333 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CSF1RP07333 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSF1RP07333 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSF1RP07333 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC16.4■□□□□ 0.22
CSF1RP07333 AC015813.5-201ENST00000624641 1514 ntBASIC16.4■□□□□ 0.22
CSF1RP07333 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.4■□□□□ 0.22
CSF1RP07333 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CSF1RP07333 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CSF1RP07333 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSF1RP07333 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.4■□□□□ 0.22
CSF1RP07333 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSF1RP07333 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSF1RP07333 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSF1RP07333 AC105206.1-202ENST00000314927 2368 ntBASIC16.4■□□□□ 0.22
CSF1RP07333 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSF1RP07333 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms