Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PARPBPQ9NWS1 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 RN7SL564P-201ENST00000496309 250 ntBASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 RNA5SP423-201ENST00000517127 109 ntBASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 AP002803.1-201ENST00000528836 498 ntBASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 AC016629.1-201ENST00000596579 586 ntBASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 AC140113.1-201ENST00000603467 169 ntBASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 AL031673.1-201ENST00000611460 466 ntBASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 AL805961.1-201ENST00000642026 753 ntBASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PARPBPQ9NWS1 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 AC040160.2-201ENST00000623816 1675 ntBASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PARPBPQ9NWS1 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms