Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 RBMX2P5-201ENST00000424312 969 ntBASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 CRIP1P2-201ENST00000425396 228 ntBASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 RN7SL789P-201ENST00000478944 293 ntBASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 AC027601.5-201ENST00000624065 2482 ntBASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 SNORA50.1-201ENST00000628590 135 ntBASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 Z82244.1-201ENST00000631502 840 ntBASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.79□□□□□ -0.04
TRMT13Q9NUP7 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 MARK2P9-201ENST00000430958 1727 ntBASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 PMF1-201ENST00000368273 884 ntTSL 2 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 OR2T32P-201ENST00000403423 963 ntBASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 AP001331.1-201ENST00000413008 1015 ntBASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 AL954722.1-201ENST00000431238 259 ntBASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 ACTG1P23-201ENST00000437653 1074 ntBASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 RN7SL2-201ENST00000490232 300 ntBASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 RN7SL4P-201ENST00000584058 295 ntBASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 LINC00638-201ENST00000555578 2518 ntBASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRMT13Q9NUP7 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 AC011239.2-201ENST00000624820 1489 ntBASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRMT13Q9NUP7 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms