Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 AC005077.3-201ENST00000449614 213 ntBASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 IQSEC3P1-201ENST00000538799 536 ntBASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 CR383656.3-201ENST00000551315 183 ntBASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 NT5C-204ENST00000578337 582 ntTSL 2 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 AP001542.1-201ENST00000591314 200 ntBASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 AP000240.1-201ENST00000609910 452 ntBASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 DDC-212ENST00000615193 1674 ntTSL 3 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 AC011491.1-203ENST00000637688 543 ntBASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 PEG13-201ENST00000631594 5667 ntBASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD3Q7Z3D4 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 PCDHA5-203ENST00000614258 4248 ntBASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 AC073210.1-201ENST00000414799 232 ntBASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 RPSAP31-201ENST00000416648 895 ntBASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 NPM1P43-201ENST00000558669 786 ntBASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 AC073911.3-201ENST00000624401 631 ntBASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 AL445209.1-201ENST00000607269 3491 ntBASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 EGLN3-205ENST00000547327 2849 ntBASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSMD3Q7Z3D4 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.75□□□□□ -0.21
LYSMD3Q7Z3D4 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms