Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.85□□□□□ -0.03
CASP4P49662 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP4P49662 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
CASP4P49662 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
CASP4P49662 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CASP4P49662 POM121L14P-201ENST00000406100 1558 ntBASIC14.85□□□□□ -0.03
CASP4P49662 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP4P49662 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CASP4P49662 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP4P49662 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP4P49662 KRT8P42-201ENST00000405771 1399 ntBASIC14.85□□□□□ -0.03
CASP4P49662 AL356585.2-201ENST00000625078 2396 ntBASIC14.84□□□□□ -0.03
CASP4P49662 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.84□□□□□ -0.03
CASP4P49662 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC14.84□□□□□ -0.03
CASP4P49662 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.84□□□□□ -0.03
CASP4P49662 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CASP4P49662 GBAP1-208ENST00000566701 1546 ntBASIC14.84□□□□□ -0.03
CASP4P49662 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.84□□□□□ -0.03
CASP4P49662 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 AC041040.1-201ENST00000425197 460 ntBASIC14.84□□□□□ -0.03
CASP4P49662 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 AL354861.1-201ENST00000445213 355 ntBASIC14.84□□□□□ -0.03
CASP4P49662 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC14.84□□□□□ -0.03
CASP4P49662 DPY19L2P5-201ENST00000456300 331 ntBASIC14.84□□□□□ -0.03
CASP4P49662 RN7SL181P-201ENST00000462921 277 ntBASIC14.84□□□□□ -0.03
CASP4P49662 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.84□□□□□ -0.03
CASP4P49662 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.84□□□□□ -0.03
CASP4P49662 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.84□□□□□ -0.03
CASP4P49662 AC087045.2-201ENST00000606279 1003 ntBASIC14.84□□□□□ -0.03
CASP4P49662 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CASP4P49662 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.84□□□□□ -0.03
CASP4P49662 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.84□□□□□ -0.03
CASP4P49662 AC073911.3-201ENST00000624401 631 ntBASIC14.84□□□□□ -0.03
CASP4P49662 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.84□□□□□ -0.03
CASP4P49662 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.84□□□□□ -0.03
CASP4P49662 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CASP4P49662 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CASP4P49662 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC14.84□□□□□ -0.03
CASP4P49662 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CASP4P49662 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.83□□□□□ -0.03
CASP4P49662 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CASP4P49662 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC14.83□□□□□ -0.03
CASP4P49662 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC14.83□□□□□ -0.03
CASP4P49662 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CASP4P49662 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CASP4P49662 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC14.83□□□□□ -0.03
CASP4P49662 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CASP4P49662 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
CASP4P49662 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CASP4P49662 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC14.83□□□□□ -0.04
CASP4P49662 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CASP4P49662 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CASP4P49662 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CASP4P49662 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CASP4P49662 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CASP4P49662 GULOP-201ENST00000454030 748 ntBASIC14.83□□□□□ -0.04
CASP4P49662 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC14.83□□□□□ -0.04
CASP4P49662 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.83□□□□□ -0.04
CASP4P49662 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CASP4P49662 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CASP4P49662 AL031713.1-201ENST00000564813 661 ntBASIC14.83□□□□□ -0.04
CASP4P49662 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.83□□□□□ -0.04
CASP4P49662 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CASP4P49662 AC140113.1-201ENST00000603467 169 ntBASIC14.83□□□□□ -0.04
CASP4P49662 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CASP4P49662 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CASP4P49662 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CASP4P49662 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.83□□□□□ -0.04
CASP4P49662 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.83□□□□□ -0.04
CASP4P49662 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CASP4P49662 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CASP4P49662 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.83□□□□□ -0.04
CASP4P49662 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CASP4P49662 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CASP4P49662 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CASP4P49662 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.83□□□□□ -0.04
CASP4P49662 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC14.82□□□□□ -0.04
CASP4P49662 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC14.82□□□□□ -0.04
CASP4P49662 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC14.82□□□□□ -0.04
CASP4P49662 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC14.82□□□□□ -0.04
CASP4P49662 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CASP4P49662 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms