Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC024681.1-201ENST00000521917 487 ntBASIC14.28□□□□□ -0.12
SLC1A1P43005 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SLC1A1P43005 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC1A1P43005 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SLC1A1P43005 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC1A1P43005 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 AC107375.1-201ENST00000564464 2231 ntBASIC14.28□□□□□ -0.12
SLC1A1P43005 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC1A1P43005 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SLC1A1P43005 AP001462.1-201ENST00000594089 452 ntBASIC14.28□□□□□ -0.12
SLC1A1P43005 AL118506.1-201ENST00000601296 3082 ntBASIC14.28□□□□□ -0.12
SLC1A1P43005 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.28□□□□□ -0.12
SLC1A1P43005 AL008721.1-201ENST00000609964 604 ntBASIC14.28□□□□□ -0.12
SLC1A1P43005 MICA-210ENST00000616296 2260 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC1A1P43005 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC1A1P43005 AL022323.5-201ENST00000624101 2059 ntBASIC14.28□□□□□ -0.12
SLC1A1P43005 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A1P43005 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A1P43005 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A1P43005 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A1P43005 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A1P43005 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
SLC1A1P43005 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A1P43005 AL450468.2-201ENST00000565955 1889 ntBASIC14.27□□□□□ -0.12
SLC1A1P43005 AL031587.5-201ENST00000624344 1849 ntBASIC14.27□□□□□ -0.12
SLC1A1P43005 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A1P43005 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A1P43005 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC14.27□□□□□ -0.12
SLC1A1P43005 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A1P43005 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A1P43005 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SLC1A1P43005 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SLC1A1P43005 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A1P43005 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.27□□□□□ -0.12
SLC1A1P43005 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SLC1A1P43005 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.27□□□□□ -0.12
SLC1A1P43005 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SLC1A1P43005 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC1A1P43005 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
SLC1A1P43005 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
SLC1A1P43005 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC1A1P43005 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC1A1P43005 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.27□□□□□ -0.13
SLC1A1P43005 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC1A1P43005 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC1A1P43005 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 AC012618.1-201ENST00000461223 412 ntBASIC14.27□□□□□ -0.13
SLC1A1P43005 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC1A1P43005 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC1A1P43005 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.27□□□□□ -0.13
SLC1A1P43005 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SLC1A1P43005 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC1A1P43005 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC14.27□□□□□ -0.13
SLC1A1P43005 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC1A1P43005 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC14.27□□□□□ -0.13
SLC1A1P43005 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A1P43005 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SLC1A1P43005 AL031432.4-201ENST00000641729 2190 ntBASIC14.26□□□□□ -0.13
SLC1A1P43005 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SLC1A1P43005 FP325330.2-201ENST00000624219 5630 ntBASIC14.26□□□□□ -0.13
SLC1A1P43005 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC1A1P43005 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC1A1P43005 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A1P43005 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC1A1P43005 Z97180.1-201ENST00000445173 988 ntBASIC14.26□□□□□ -0.13
SLC1A1P43005 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.26□□□□□ -0.13
SLC1A1P43005 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SLC1A1P43005 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms