Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 AC023051.2-201ENST00000541141 460 ntBASIC15.94■□□□□ 0.14
HLA-DOAP06340 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 AP000553.2-201ENST00000609038 441 ntBASIC15.94■□□□□ 0.14
HLA-DOAP06340 AC123912.6-201ENST00000612657 315 ntBASIC15.94■□□□□ 0.14
HLA-DOAP06340 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 MME-218ENST00000625667 363 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DOAP06340 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DOAP06340 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 MEX3B-202ENST00000558133 4333 ntBASIC15.93■□□□□ 0.14
HLA-DOAP06340 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 AC009474.1-201ENST00000455096 1565 ntBASIC15.93■□□□□ 0.14
HLA-DOAP06340 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 STK16-202ENST00000409260 1493 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 FAM226B-201ENST00000602508 1490 ntBASIC15.93■□□□□ 0.14
HLA-DOAP06340 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 AC136604.1-202ENST00000425471 771 ntBASIC15.93■□□□□ 0.14
HLA-DOAP06340 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 AC091304.3-201ENST00000566500 716 ntBASIC15.93■□□□□ 0.14
HLA-DOAP06340 AC079414.2-201ENST00000567157 1104 ntBASIC15.93■□□□□ 0.14
HLA-DOAP06340 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 AP001120.3-201ENST00000585729 489 ntBASIC15.93■□□□□ 0.14
HLA-DOAP06340 MDC1-209ENST00000613547 830 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC15.93■□□□□ 0.14
HLA-DOAP06340 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 AL031587.5-201ENST00000624344 1849 ntBASIC15.93■□□□□ 0.14
HLA-DOAP06340 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DOAP06340 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
HLA-DOAP06340 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 AC034205.3-201ENST00000603595 1376 ntBASIC15.92■□□□□ 0.14
HLA-DOAP06340 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 AIG1-203ENST00000367596 559 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 OR2T32P-201ENST00000403423 963 ntBASIC15.92■□□□□ 0.14
HLA-DOAP06340 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DOAP06340 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 RPE-208ENST00000436630 1128 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DOAP06340 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms