Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC11.49□□□□□ -0.57
CD74P04233 MCU-204ENST00000536019 3224 ntTSL 2 BASIC11.48□□□□□ -0.57
CD74P04233 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
CD74P04233 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC11.48□□□□□ -0.57
CD74P04233 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC11.48□□□□□ -0.57
CD74P04233 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
CD74P04233 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC11.48□□□□□ -0.57
CD74P04233 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC11.48□□□□□ -0.57
CD74P04233 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 CICP18-201ENST00000406017 2812 ntBASIC11.48□□□□□ -0.57
CD74P04233 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CD74P04233 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC11.48□□□□□ -0.57
CD74P04233 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC11.48□□□□□ -0.57
CD74P04233 AL354877.1-201ENST00000424412 413 ntBASIC11.48□□□□□ -0.57
CD74P04233 TTTY23B-201ENST00000442790 549 ntBASIC11.48□□□□□ -0.57
CD74P04233 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC11.48□□□□□ -0.57
CD74P04233 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC11.48□□□□□ -0.57
CD74P04233 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC11.48□□□□□ -0.57
CD74P04233 AC116345.2-201ENST00000512837 523 ntBASIC11.48□□□□□ -0.57
CD74P04233 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC11.48□□□□□ -0.57
CD74P04233 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC11.48□□□□□ -0.57
CD74P04233 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC11.48□□□□□ -0.57
CD74P04233 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC11.48□□□□□ -0.57
CD74P04233 FAM90A7P-201ENST00000382628 1395 ntBASIC11.48□□□□□ -0.57
CD74P04233 FAM90A23P-201ENST00000400136 1395 ntBASIC11.48□□□□□ -0.57
CD74P04233 KRT8P29-201ENST00000420409 1371 ntBASIC11.48□□□□□ -0.57
CD74P04233 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC11.48□□□□□ -0.57
CD74P04233 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
CD74P04233 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CD74P04233 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.48□□□□□ -0.57
CD74P04233 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC11.48□□□□□ -0.57
CD74P04233 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
CD74P04233 AC139491.6-202ENST00000637171 2077 ntBASIC11.48□□□□□ -0.57
CD74P04233 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CD74P04233 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CD74P04233 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC11.48□□□□□ -0.57
CD74P04233 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
CD74P04233 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC11.48□□□□□ -0.57
CD74P04233 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CD74P04233 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC11.47□□□□□ -0.57
CD74P04233 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
CD74P04233 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC11.47□□□□□ -0.57
CD74P04233 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CD74P04233 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC11.47□□□□□ -0.57
CD74P04233 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC11.47□□□□□ -0.57
CD74P04233 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC11.47□□□□□ -0.57
CD74P04233 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC11.47□□□□□ -0.57
CD74P04233 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 CTAGE7P-201ENST00000435712 2436 ntBASIC11.47□□□□□ -0.57
CD74P04233 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 AC243964.3-201ENST00000623022 2028 ntBASIC11.47□□□□□ -0.57
CD74P04233 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 PABPC1P2-201ENST00000471997 1805 ntBASIC11.47□□□□□ -0.57
CD74P04233 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
CD74P04233 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC11.47□□□□□ -0.57
CD74P04233 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CD74P04233 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms