Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 DUTP3-201ENST00000450025 415 ntBASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 ACTG1P17-201ENST00000558391 1119 ntBASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 AL161773.1-201ENST00000624845 863 ntBASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 AC018445.4-201ENST00000624066 2291 ntBASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 TEKT4P2-202ENST00000559466 1312 ntBASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 STK25-235ENST00000543554 2556 ntTSL 2 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 TBC1D27-202ENST00000424239 1573 ntBASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 KRT8P18-201ENST00000413425 1445 ntBASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 F2-205ENST00000530231 1849 ntTSL 5 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AC098934.1-203ENST00000442868 1262 ntBASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 COQ10BP2-201ENST00000513804 724 ntBASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AC132825.4-202ENST00000578792 434 ntBASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AC020922.3-201ENST00000595064 547 ntBASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AL356740.1-201ENST00000602192 1297 ntBASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms