Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SVIPQ8NHG7 ACOT9-204ENST00000379303 3117 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SVIPQ8NHG7 HCP5B-201ENST00000630472 1889 ntBASIC8□□□□□ -1.13
SVIPQ8NHG7 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC8□□□□□ -1.13
SVIPQ8NHG7 SYK-201ENST00000375746 4990 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
SVIPQ8NHG7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SVIPQ8NHG7 PNLIPRP1-201ENST00000358834 1497 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
SVIPQ8NHG7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC8□□□□□ -1.13
SVIPQ8NHG7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC8□□□□□ -1.13
SVIPQ8NHG7 TP73-AS1-210ENST00000637775 1455 ntBASIC8□□□□□ -1.13
SVIPQ8NHG7 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
SVIPQ8NHG7 CHEK1-204ENST00000438015 4153 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
SVIPQ8NHG7 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC8□□□□□ -1.13
SVIPQ8NHG7 NIPSNAP3B-201ENST00000374762 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 CORO2A-202ENST00000375077 5459 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 MTSS1-205ENST00000518547 4944 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 EPHB2-203ENST00000374632 3677 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 AC138951.1-201ENST00000502532 2685 ntBASIC7.99□□□□□ -1.13
SVIPQ8NHG7 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 PRAMEF8-201ENST00000357367 1844 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 ZNF431-207ENST00000600692 1971 ntTSL 5 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 AIMP1-201ENST00000358008 2412 ntAPPRIS P3 TSL 2 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 AC020978.10-201ENST00000623181 2704 ntBASIC7.99□□□□□ -1.13
SVIPQ8NHG7 PRR27-202ENST00000502294 3007 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 ADGRF4-201ENST00000283303 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 PTCH1-208ENST00000430669 8232 ntTSL 5 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 AC079610.1-201ENST00000360083 1727 ntTSL 2 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 CAP1-204ENST00000372798 1563 ntAPPRIS ALT1 TSL 5 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 LINC00339-201ENST00000404210 1189 ntBASIC7.99□□□□□ -1.13
SVIPQ8NHG7 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 AC022701.1-201ENST00000462935 622 ntBASIC7.99□□□□□ -1.13
SVIPQ8NHG7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 GAPDHP40-201ENST00000505218 1006 ntBASIC7.99□□□□□ -1.13
SVIPQ8NHG7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 UBE2D2-208ENST00000511725 656 ntTSL 2 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 RNU6-551P-201ENST00000516661 103 ntBASIC7.99□□□□□ -1.13
SVIPQ8NHG7 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 DUT-210ENST00000559935 569 ntTSL 3 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 AC090286.3-201ENST00000573133 187 ntBASIC7.99□□□□□ -1.13
SVIPQ8NHG7 AC015936.1-201ENST00000591013 1028 ntBASIC7.99□□□□□ -1.13
SVIPQ8NHG7 SNORA35B-201ENST00000607417 129 ntBASIC7.99□□□□□ -1.13
SVIPQ8NHG7 MAP7D3-203ENST00000370661 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 CSNK1A1-201ENST00000261798 6067 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 BMP4-202ENST00000417573 1784 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 ANGPT2-202ENST00000338312 1466 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 AL590426.1-201ENST00000440811 2285 ntBASIC7.99□□□□□ -1.13
SVIPQ8NHG7 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 CMKLR1-201ENST00000312143 5283 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SVIPQ8NHG7 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SVIPQ8NHG7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
SVIPQ8NHG7 MAPK10-301ENST00000641313 2482 ntBASIC7.98□□□□□ -1.13
SVIPQ8NHG7 CDX2-201ENST00000381020 4053 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SVIPQ8NHG7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SVIPQ8NHG7 ATP1A3-208ENST00000545399 3618 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
SVIPQ8NHG7 AC005261.2-201ENST00000593427 4258 ntBASIC7.98□□□□□ -1.13
SVIPQ8NHG7 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SVIPQ8NHG7 DCAF8-202ENST00000368073 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SVIPQ8NHG7 HSFY2-203ENST00000382852 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
SVIPQ8NHG7 TRIM51FP-201ENST00000526452 1353 ntBASIC7.98□□□□□ -1.13
SVIPQ8NHG7 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SVIPQ8NHG7 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms