Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDE6BP35913 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC16.58■□□□□ 0.25
PDE6BP35913 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PDE6BP35913 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDE6BP35913 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PDE6BP35913 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6BP35913 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PDE6BP35913 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6BP35913 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PDE6BP35913 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6BP35913 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6BP35913 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PDE6BP35913 CFL1P6-201ENST00000400899 494 ntBASIC16.58■□□□□ 0.24
PDE6BP35913 TEDDM2P-201ENST00000414169 786 ntBASIC16.58■□□□□ 0.24
PDE6BP35913 RPL13AP5-201ENST00000439189 612 ntBASIC16.58■□□□□ 0.24
PDE6BP35913 AP000343.1-201ENST00000440602 385 ntBASIC16.58■□□□□ 0.24
PDE6BP35913 AC010677.1-201ENST00000441690 412 ntBASIC16.58■□□□□ 0.24
PDE6BP35913 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6BP35913 RN7SL677P-201ENST00000466970 319 ntBASIC16.58■□□□□ 0.24
PDE6BP35913 AC008021.1-201ENST00000474180 414 ntBASIC16.58■□□□□ 0.24
PDE6BP35913 PRDX2P3-201ENST00000515779 586 ntBASIC16.58■□□□□ 0.24
PDE6BP35913 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC16.58■□□□□ 0.24
PDE6BP35913 AC079601.2-201ENST00000547729 775 ntBASIC16.58■□□□□ 0.24
PDE6BP35913 RN7SL300P-201ENST00000582522 318 ntBASIC16.58■□□□□ 0.24
PDE6BP35913 BOLA3P2-201ENST00000586496 323 ntBASIC16.58■□□□□ 0.24
PDE6BP35913 AL589743.3-201ENST00000604121 517 ntBASIC16.58■□□□□ 0.24
PDE6BP35913 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC16.58■□□□□ 0.24
PDE6BP35913 AC099795.2-201ENST00000639582 440 ntBASIC16.58■□□□□ 0.24
PDE6BP35913 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
PDE6BP35913 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
PDE6BP35913 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC16.58■□□□□ 0.24
PDE6BP35913 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC16.58■□□□□ 0.24
PDE6BP35913 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6BP35913 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6BP35913 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6BP35913 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6BP35913 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PDE6BP35913 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6BP35913 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PDE6BP35913 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PDE6BP35913 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6BP35913 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6BP35913 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.58■□□□□ 0.24
PDE6BP35913 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
PDE6BP35913 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6BP35913 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDE6BP35913 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
PDE6BP35913 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6BP35913 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6BP35913 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6BP35913 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.57■□□□□ 0.24
PDE6BP35913 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6BP35913 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6BP35913 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6BP35913 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.57■□□□□ 0.24
PDE6BP35913 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6BP35913 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDE6BP35913 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6BP35913 AL137077.2-201ENST00000635124 1608 ntBASIC16.57■□□□□ 0.24
PDE6BP35913 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PDE6BP35913 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6BP35913 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC16.57■□□□□ 0.24
PDE6BP35913 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PDE6BP35913 PGAM1P10-201ENST00000402426 761 ntBASIC16.57■□□□□ 0.24
PDE6BP35913 HMGN1P4-201ENST00000419500 290 ntBASIC16.57■□□□□ 0.24
PDE6BP35913 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC16.57■□□□□ 0.24
PDE6BP35913 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC16.57■□□□□ 0.24
PDE6BP35913 RPL21P135-201ENST00000442539 791 ntBASIC16.57■□□□□ 0.24
PDE6BP35913 RN7SL33P-201ENST00000462543 342 ntBASIC16.57■□□□□ 0.24
PDE6BP35913 GOLGA2P10-201ENST00000550961 817 ntBASIC16.57■□□□□ 0.24
PDE6BP35913 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.57■□□□□ 0.24
PDE6BP35913 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC16.57■□□□□ 0.24
PDE6BP35913 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC16.57■□□□□ 0.24
PDE6BP35913 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PDE6BP35913 AL078624.1-201ENST00000604004 547 ntBASIC16.57■□□□□ 0.24
PDE6BP35913 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6BP35913 AC006273.1-201ENST00000606966 861 ntBASIC16.57■□□□□ 0.24
PDE6BP35913 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC16.57■□□□□ 0.24
PDE6BP35913 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PDE6BP35913 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PDE6BP35913 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6BP35913 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDE6BP35913 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDE6BP35913 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PDE6BP35913 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC16.56■□□□□ 0.24
PDE6BP35913 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PDE6BP35913 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PDE6BP35913 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PDE6BP35913 LINC00552-201ENST00000625151 2579 ntBASIC16.56■□□□□ 0.24
PDE6BP35913 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.56■□□□□ 0.24
PDE6BP35913 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC16.56■□□□□ 0.24
PDE6BP35913 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PDE6BP35913 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDE6BP35913 KLK8-203ENST00000347619 555 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms