Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SCN2BO60939 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SCN2BO60939 AC104590.1-202ENST00000558368 1921 ntBASIC12.98□□□□□ -0.33
SCN2BO60939 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
SCN2BO60939 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
SCN2BO60939 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.97□□□□□ -0.33
SCN2BO60939 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.97□□□□□ -0.33
SCN2BO60939 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.97□□□□□ -0.33
SCN2BO60939 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
SCN2BO60939 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.97□□□□□ -0.33
SCN2BO60939 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.97□□□□□ -0.33
SCN2BO60939 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.97□□□□□ -0.33
SCN2BO60939 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.97□□□□□ -0.33
SCN2BO60939 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC12.97□□□□□ -0.33
SCN2BO60939 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.97□□□□□ -0.33
SCN2BO60939 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.97□□□□□ -0.33
SCN2BO60939 AL353637.1-201ENST00000451571 732 ntBASIC12.97□□□□□ -0.33
SCN2BO60939 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
SCN2BO60939 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.97□□□□□ -0.33
SCN2BO60939 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.97□□□□□ -0.33
SCN2BO60939 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.97□□□□□ -0.33
SCN2BO60939 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.97□□□□□ -0.33
SCN2BO60939 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.97□□□□□ -0.33
SCN2BO60939 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.97□□□□□ -0.33
SCN2BO60939 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.97□□□□□ -0.33
SCN2BO60939 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SCN2BO60939 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SCN2BO60939 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SCN2BO60939 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SCN2BO60939 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SCN2BO60939 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.97□□□□□ -0.33
SCN2BO60939 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.97□□□□□ -0.33
SCN2BO60939 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.97□□□□□ -0.33
SCN2BO60939 AL513497.1-201ENST00000624273 2083 ntBASIC12.97□□□□□ -0.33
SCN2BO60939 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCN2BO60939 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SCN2BO60939 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.96□□□□□ -0.33
SCN2BO60939 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCN2BO60939 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SCN2BO60939 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.96□□□□□ -0.33
SCN2BO60939 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.96□□□□□ -0.33
SCN2BO60939 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.96□□□□□ -0.33
SCN2BO60939 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.96□□□□□ -0.33
SCN2BO60939 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCN2BO60939 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.96□□□□□ -0.33
SCN2BO60939 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SCN2BO60939 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.96□□□□□ -0.33
SCN2BO60939 ELK2AP-201ENST00000392510 1007 ntBASIC12.96□□□□□ -0.33
SCN2BO60939 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.96□□□□□ -0.33
SCN2BO60939 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.96□□□□□ -0.33
SCN2BO60939 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.96□□□□□ -0.33
SCN2BO60939 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.96□□□□□ -0.33
SCN2BO60939 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SCN2BO60939 AC006033.1-201ENST00000440505 426 ntBASIC12.96□□□□□ -0.33
SCN2BO60939 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SCN2BO60939 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.96□□□□□ -0.33
SCN2BO60939 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.96□□□□□ -0.33
SCN2BO60939 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SCN2BO60939 AC091804.1-201ENST00000486888 567 ntBASIC12.96□□□□□ -0.33
SCN2BO60939 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.96□□□□□ -0.33
SCN2BO60939 ZNF767P-206ENST00000513792 565 ntBASIC12.96□□□□□ -0.33
SCN2BO60939 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.96□□□□□ -0.33
SCN2BO60939 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.96□□□□□ -0.33
SCN2BO60939 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.96□□□□□ -0.33
SCN2BO60939 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCN2BO60939 MIR4265-201ENST00000582152 99 ntBASIC12.96□□□□□ -0.33
SCN2BO60939 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.96□□□□□ -0.33
SCN2BO60939 AL022328.3-201ENST00000607943 679 ntBASIC12.96□□□□□ -0.33
SCN2BO60939 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.96□□□□□ -0.33
SCN2BO60939 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.96□□□□□ -0.33
SCN2BO60939 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SCN2BO60939 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms