Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC019294.4-201ENST00000561777 2905 ntBASIC17.28■□□□□ 0.36
CHL1O00533 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHL1O00533 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHL1O00533 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CHL1O00533 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHL1O00533 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHL1O00533 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHL1O00533 AC004522.1-201ENST00000419978 654 ntBASIC17.28■□□□□ 0.36
CHL1O00533 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC17.28■□□□□ 0.36
CHL1O00533 AC114781.1-201ENST00000450559 1028 ntBASIC17.28■□□□□ 0.36
CHL1O00533 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC17.28■□□□□ 0.36
CHL1O00533 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHL1O00533 AC083801.1-201ENST00000491689 358 ntBASIC17.28■□□□□ 0.36
CHL1O00533 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHL1O00533 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC17.28■□□□□ 0.36
CHL1O00533 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC17.28■□□□□ 0.36
CHL1O00533 DUT-207ENST00000559416 635 ntTSL 2 BASIC17.28■□□□□ 0.36
CHL1O00533 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHL1O00533 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC17.28■□□□□ 0.36
CHL1O00533 MDC1-209ENST00000613547 830 ntTSL 5 BASIC17.28■□□□□ 0.36
CHL1O00533 PPP1R26P2-201ENST00000611403 3595 ntBASIC17.28■□□□□ 0.36
CHL1O00533 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHL1O00533 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC17.28■□□□□ 0.36
CHL1O00533 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHL1O00533 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHL1O00533 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHL1O00533 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHL1O00533 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHL1O00533 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHL1O00533 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHL1O00533 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHL1O00533 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CHL1O00533 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHL1O00533 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.27■□□□□ 0.36
CHL1O00533 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHL1O00533 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.27■□□□□ 0.36
CHL1O00533 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHL1O00533 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CHL1O00533 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CHL1O00533 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHL1O00533 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHL1O00533 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHL1O00533 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHL1O00533 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CHL1O00533 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHL1O00533 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CHL1O00533 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CHL1O00533 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHL1O00533 KRT18P33-201ENST00000398525 1043 ntBASIC17.27■□□□□ 0.36
CHL1O00533 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC17.27■□□□□ 0.36
CHL1O00533 BICD1P1-201ENST00000457832 1222 ntBASIC17.27■□□□□ 0.36
CHL1O00533 AC092896.1-201ENST00000465850 380 ntBASIC17.27■□□□□ 0.36
CHL1O00533 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC17.27■□□□□ 0.36
CHL1O00533 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC17.27■□□□□ 0.36
CHL1O00533 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC17.27■□□□□ 0.36
CHL1O00533 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC17.27■□□□□ 0.36
CHL1O00533 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC17.27■□□□□ 0.36
CHL1O00533 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC17.27■□□□□ 0.36
CHL1O00533 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.27■□□□□ 0.36
CHL1O00533 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC17.27■□□□□ 0.36
CHL1O00533 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC17.27■□□□□ 0.36
CHL1O00533 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC17.27■□□□□ 0.36
CHL1O00533 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC17.27■□□□□ 0.36
CHL1O00533 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC17.27■□□□□ 0.36
CHL1O00533 GGNBP1-204ENST00000613113 887 ntBASIC17.27■□□□□ 0.36
CHL1O00533 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC17.27■□□□□ 0.36
CHL1O00533 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.27■□□□□ 0.36
CHL1O00533 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHL1O00533 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHL1O00533 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHL1O00533 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHL1O00533 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHL1O00533 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHL1O00533 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHL1O00533 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHL1O00533 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC17.27■□□□□ 0.35
CHL1O00533 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHL1O00533 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CHL1O00533 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC17.27■□□□□ 0.35
CHL1O00533 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC17.27■□□□□ 0.35
CHL1O00533 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHL1O00533 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHL1O00533 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CHL1O00533 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CHL1O00533 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHL1O00533 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHL1O00533 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC17.27■□□□□ 0.35
CHL1O00533 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CHL1O00533 AC125807.2-201ENST00000513358 3514 ntBASIC17.26■□□□□ 0.35
CHL1O00533 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
CHL1O00533 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CHL1O00533 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHL1O00533 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC17.26■□□□□ 0.35
CHL1O00533 FAM226B-201ENST00000602508 1490 ntBASIC17.26■□□□□ 0.35
CHL1O00533 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC17.26■□□□□ 0.35
CHL1O00533 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms