Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 AC093462.1-201ENST00000621167 1683 ntBASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 PSMD4P1-201ENST00000433951 1109 ntBASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 KRT18P66-201ENST00000452970 1269 ntBASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 AC025186.1-201ENST00000478174 870 ntBASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 OR2A1-AS1-210ENST00000496968 531 ntBASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 RPS23-207ENST00000511844 530 ntTSL 2 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 TREHP1-201ENST00000531328 465 ntBASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 GOLGA2P7-209ENST00000560408 745 ntBASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 AP005264.6-204ENST00000588436 719 ntBASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 MIR6746-201ENST00000620971 63 ntBASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NPIPA3F8WFD2 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 AC117503.4-201ENST00000623229 1418 ntBASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 AL391647.1-201ENST00000395664 511 ntBASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 AQP7P5-201ENST00000428759 1049 ntBASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 AQP7P4-201ENST00000447083 1042 ntBASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 AQP7P2-201ENST00000453967 1041 ntBASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 RN7SL582P-201ENST00000491078 279 ntBASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 NAMA-206ENST00000605377 509 ntTSL 5 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 AC008972.2-201ENST00000606587 494 ntBASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 483.2 ms