Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 EEF1GP8-201ENST00000506566 1154 ntBASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 RN7SL470P-201ENST00000583069 259 ntBASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 RPS5-204ENST00000598098 536 ntTSL 2 BASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 AC140113.1-201ENST00000603467 169 ntBASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 LINC00244-201ENST00000625073 613 ntBASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHROOM3Q8TF72 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 Z97653.2-201ENST00000623057 1418 ntBASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 AGPAT5P1-201ENST00000455855 1019 ntBASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 METTL7AP1-201ENST00000547343 496 ntBASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 AC013553.1-201ENST00000560906 267 ntBASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 AC244250.3-201ENST00000620749 366 ntBASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 AL118506.1-201ENST00000601296 3082 ntBASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 AC005154.3-201ENST00000419639 1393 ntBASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.86□□□□□ -0.19
SHROOM3Q8TF72 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 Z82170.1-201ENST00000625081 3192 ntBASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 AC073592.2-201ENST00000623062 780 ntBASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SHROOM3Q8TF72 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms